RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 BOD1L2Q8IYS8 172 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 PPP1R17O96001 155 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 PRSS1P07477 247 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 TRPT1Q86TN4 253 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 A8MTW9 85 aa11.53□□□□□ -0.56
CDC42BPB-204ENST00000559043 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-204ENST00000559043 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-204ENST00000559043 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-204ENST00000559043 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
CDC42BPB-204ENST00000559043 MGPP08493 103 aa11.52□□□□□ -0.56
CDC42BPB-204ENST00000559043 CDKN1BP46527 198 aa11.52□□□□□ -0.56
CDC42BPB-204ENST00000559043 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.56
CDC42BPB-204ENST00000559043 ORAOV1Q8WV07 137 aa11.52□□□□□ -0.56
CDC42BPB-204ENST00000559043 C9orf85Q96MD7 179 aa11.52□□□□□ -0.56
CDC42BPB-204ENST00000559043 IGHV3-16A0A0C4DH30 117 aa11.52□□□□□ -0.57
CDC42BPB-204ENST00000559043 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-204ENST00000559043 STHQ8IWL8 128 aa11.52□□□□□ -0.57
CDC42BPB-204ENST00000559043 COX11Q9Y6N1 276 aa11.52□□□□□ -0.57
CDC42BPB-204ENST00000559043 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
CDC42BPB-204ENST00000559043 IGKCP01834 107 aa11.51□□□□□ -0.57
CDC42BPB-204ENST00000559043 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 SIVA1O15304 175 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 RPL32P62910 135 aaKnown RBP11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 TOMM6Q96B49 74 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 A8MZ25 164 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 DPM2O94777 84 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
CDC42BPB-204ENST00000559043 NPSP0C0P6 89 aa11.49□□□□□ -0.57
CDC42BPB-204ENST00000559043 SPINK13Q1W4C9 94 aa11.49□□□□□ -0.57
CDC42BPB-204ENST00000559043 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 A0A087WX48 190 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 JPT2Q9H910 190 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 MDFICQ9P1T7 246 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 TRAV12-1A0A0B4J245 112 aa11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPB-204ENST00000559043 SUMO4Q6EEV6 95 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 Q6ZVH6 145 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 PCP2Q8IVA1 136 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 CSTL1Q9H114 145 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 NMUP48645 174 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 TMEM97Q5BJF2 176 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 XCL2Q9UBD3 114 aa11.47□□□□□ -0.57
CDC42BPB-204ENST00000559043 TAX1BP3O14907 124 aa11.46□□□□□ -0.58
CDC42BPB-204ENST00000559043 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.58
CDC42BPB-204ENST00000559043 TCTAP57738 103 aa11.46□□□□□ -0.58
CDC42BPB-204ENST00000559043 SCGB3A1Q96QR1 104 aa11.46□□□□□ -0.58
CDC42BPB-204ENST00000559043 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 A0A087WWL8 130 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 RBMY1A1P0DJD3 496 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 RBMY1CP0DJD4 496 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 PLNP26678 52 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 SEC11AP67812 179 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 ZC2HC1BQ5TFG8 222 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 C2orf66Q6UXQ4 117 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 NEXN-AS1Q8NBZ9 246 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
CDC42BPB-204ENST00000559043 H7C1H1 209 aa11.44□□□□□ -0.58
CDC42BPB-204ENST00000559043 HSD52Q0P140 79 aa11.44□□□□□ -0.58
CDC42BPB-204ENST00000559043 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
CDC42BPB-204ENST00000559043 MRAPQ8TCY5 172 aa11.44□□□□□ -0.58
CDC42BPB-204ENST00000559043 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 F8VRH5 84 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 CRYGDP07320 174 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 ERASQ7Z444 233 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 VCYO14598 125 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
CDC42BPB-204ENST00000559043 CBY3A6NI87 242 aa11.42□□□□□ -0.58
CDC42BPB-204ENST00000559043 LINC01549A6NIU2 74 aa11.42□□□□□ -0.58
CDC42BPB-204ENST00000559043 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPB-204ENST00000559043 BAALCQ8WXS3 180 aa11.42□□□□□ -0.58
CDC42BPB-204ENST00000559043 HIGD1BQ9P298 99 aa11.42□□□□□ -0.58
CDC42BPB-204ENST00000559043 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 F5H697 171 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 M0QY20 66 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 PRM2P04554 102 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 UBE2V1Q13404 147 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 NEGR1Q7Z3B1 354 aa11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
CDC42BPB-204ENST00000559043 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
CDC42BPB-204ENST00000559043 APOC4P55056 127 aa11.4□□□□□ -0.58
CDC42BPB-204ENST00000559043 FAM74A4Q5TZK3 123 aa11.4□□□□□ -0.58
CDC42BPB-204ENST00000559043 CYSLTR1Q9Y271 337 aa11.4□□□□□ -0.58
CDC42BPB-204ENST00000559043 TENM3Q9P273 2699 aa11.4□□□□□ -0.58
CDC42BPB-204ENST00000559043 CCL25O15444 150 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 ZNF876PQ49A33 203 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 IGIPA6NJ69 53 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms