RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CRYGAP11844 174 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 NFE4Q86UQ8 179 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 FAM110DQ8TAY7 271 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-214ENST00000540109 C14orf132Q9NPU4 83 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 SPRY2O43597 315 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 C1orf229Q6ZS94 237 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-214ENST00000540109 MDFICQ9P1T7 246 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 EP300Q09472 2414 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-214ENST00000540109 F8WDY8 70 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 UBE2E1P51965 193 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 UBE2E2Q96LR5 201 aa4.66□□□□□ -1.66
PTPRD-214ENST00000540109 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 ODF3BA8MYP8 253 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 PAX8Q06710 450 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 XIRP2A4UGR9 3374 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 NDUFS5O43920 106 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 SS18Q15532 418 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 Q9HAA7 133 aa4.65□□□□□ -1.66
PTPRD-214ENST00000540109 TRBV12-3P01733 135 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 GP9P14770 177 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 FUSP35637 526 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTPRD-214ENST00000540109 DYNAPQ8N1N2 210 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 WT1-ASQ06250 92 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 FOXE3Q13461 319 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 MIAQ16674 131 aa4.65□□□□□ -1.67
PTPRD-214ENST00000540109 EBI3Q14213 229 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 FANCD2OSQ96PS1 177 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 TRAV7A0A075B6U4 112 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 C5orf38Q86SI9 138 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 KIR2DL5BQ8NHK3 375 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 OPRPNQ99935 248 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-214ENST00000540109 EGR2P11161 476 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-214ENST00000540109 C4orf48Q5BLP8 95 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 WDR87Q6ZQQ6 2873 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 INSP01308 110 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 TRGV3P03979 118 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 HIST2H2BDQ6DRA6 164 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 FAM167A-AS1Q96KT0 104 aa4.64□□□□□ -1.67
PTPRD-214ENST00000540109 USF3Q68DE3 2245 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DSCR9P59020 149 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 UPK3BQ9BT76 320 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 ZNRD1Q9P1U0 126 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DSCAMO60469 2012 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 LST1O00453 97 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 UBE2AP49459 152 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 UBE2D3P61077 147 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 UBE2D2P62837 147 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 KLK9Q2XQG4 91 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 KLK9Q9UKQ9 250 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 GVINP1Q7Z2Y8 2422 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 CNOT1A5YKK6 2376 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DAZ2Q13117 558 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DAZ4Q86SG3 579 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DAZ1Q9NQZ3 744 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 DAZ3Q9NR90 486 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 MUC6Q6W4X9 2439 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 IGHV3-33P01772 117 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
PTPRD-214ENST00000540109 ODF3Q96PU9 254 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 TRIOO75962 3097 aa4.63□□□□□ -1.67
PTPRD-214ENST00000540109 NDUFA4O00483 81 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 UBE2D1P51668 147 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 TEX22C9J3V5 150 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 TMEM61Q8N0U2 210 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 ZGRF1Q86YA3 2104 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 IGLV2-8P01709 118 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 PYGO1Q9Y3Y4 419 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 PIK3CD-AS1Q5SR53 167 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 NRACQ8N912 160 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 MRPL36Q9P0J6 103 aaKnown RBP4.62□□□□□ -1.67
PTPRD-214ENST00000540109 UNC80Q8N2C7 3258 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 HCFC1P51610 2035 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 BLCAPP62952 87 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 VMO1Q7Z5L0 202 aa4.62□□□□□ -1.67
PTPRD-214ENST00000540109 TRBV7-3A0A075B6L6 115 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 H7C423 109 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 TRIAP1O43715 76 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-214ENST00000540109 IGKV1D-37A0A075B6S9 117 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 Q8N6K4 173 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 CNFNQ9BYD5 112 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 MAP1BP46821 2468 aaKnown RBP4.61□□□□□ -1.67
PTPRD-214ENST00000540109 IGHV4-4A0A075B6R2 117 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 I3L2K1 104 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 PSPHP1O15172 72 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 LINC00322Q6ZN03 302 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-214ENST00000540109 ZMAT4Q9H898 229 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 Q9H8V8 135 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 ZNF292O60281 2723 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 A0A1B0GW54 56 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 MYCNOSP40205 109 aa4.61□□□□□ -1.67
PTPRD-214ENST00000540109 CRIP2P52943 208 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-214ENST00000540109 ITLN2Q8WWU7 325 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms