RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 TRAV9-2A0A087WT02 112 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 TRAV21A0A0B4J279 112 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 IGHV3-38A0A0C4DH36 116 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 GGTLC3B5MD39 225 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 GCGP01275 180 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 IGLV2-11P01706 119 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 RNASE3P12724 160 aaKnown RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 PMCHP20382 165 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 UBE2G2P60604 165 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 GAGE5Q13069 117 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 ACOT6Q3I5F7 207 aaPredicted RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 DAZ4Q86SG3 579 aaKnown RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 OR2T35Q8NGX2 323 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 ASB13Q8WXK3 278 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 MARVELD1Q9BSK0 173 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 SDF2L1Q9HCN8 221 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 DAZ3Q9NR90 486 aaKnown RBP3.93□□□□□ -1.78
SOX6-216ENST00000533658 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 ALG5Q9Y673 324 aa3.93□□□□□ -1.78
SOX6-216ENST00000533658 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 TMSB15BA0A087X1C1 80 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 ORM1P02763 201 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 TCRAP04437 139 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 GCHFRP30047 84 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 TAS2R45P59539 299 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
SOX6-216ENST00000533658 RIGQ13278 110 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 TDRG1Q3Y452 100 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 Q8N814 137 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 S100ZQ8WXG8 99 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 BAALCQ8WXS3 180 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 TXNDC17Q9BRA2 123 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 KCNIP2Q9NS61 270 aa3.92□□□□□ -1.78
SOX6-216ENST00000533658 IGKV3D-20A0A0C4DH25 116 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 TRBV7-9A0A0J9YWB2 115 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 A0A1B0GW15 77 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 IBA57-AS1B1ANH7 110 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 M0R036 132 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 ATP6V0CP27449 155 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 CDC34P49427 236 aaPredicted RBP3.91□□□□□ -1.78
SOX6-216ENST00000533658 FGF8P55075 233 aaPredicted RBP3.91□□□□□ -1.78
SOX6-216ENST00000533658 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
SOX6-216ENST00000533658 FLI1Q01543 452 aaPredicted RBP3.91□□□□□ -1.78
SOX6-216ENST00000533658 ZNF726P1Q15940 193 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 C9orf85Q96MD7 179 aa3.91□□□□□ -1.78
SOX6-216ENST00000533658 LRP2P98164 4655 aa3.9□□□□□ -1.78
SOX6-216ENST00000533658 TRAV8-6A0A0B4J262 113 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 MUC21A0A0G2JKD1 596 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 MUC21A0A140T8X8 626 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 A0A1B0GV50 99 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 H3BVH4 76 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 CRIP1P50238 77 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 LGALSLQ3ZCW2 172 aaPredicted RBP3.9□□□□□ -1.79
SOX6-216ENST00000533658 FAM74A1Q5RGS3 127 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 RPL7L1Q6DKI1 246 aaKnown RBP3.9□□□□□ -1.79
SOX6-216ENST00000533658 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 PRADC1Q9BSG0 188 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 TMEM70Q9BUB7 260 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 PARLQ9H300 379 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 EPDR1Q9UM22 224 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 LENEPQ9Y5L5 61 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 ARL2-SNX15V9GYD0 113 aa3.9□□□□□ -1.79
SOX6-216ENST00000533658 SMLR1H3BR10 107 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 TAAR5O14804 337 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 TSPAN13O95857 204 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 PFN1P07737 140 aaKnown RBP3.89□□□□□ -1.79
SOX6-216ENST00000533658 PET100P0DJ07 73 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 RHOHQ15669 191 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 SMUG1Q53HV7 270 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 LELP1Q5T871 98 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 FAM74A4Q5TZK3 123 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 UFSP1Q6NVU6 142 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 C5orf17Q8NAS9 161 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 DEFB104AQ8WTQ1 72 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 ISOC2Q96AB3 205 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 KCNS1Q96KK3 526 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 NDFIP1Q9BT67 221 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 GTSF1LQ9H1H1 148 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
SOX6-216ENST00000533658 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 IGLV5-45A0A087WSX0 123 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 FXYD6-FXYD2A0A087WZ82 144 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 TRBV6-4A0A1B0GX49 114 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 M0R381 172 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 PPP1R2P9O14990 202 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 SH2D1AO60880 128 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 IFNA7P01567 189 aa3.88□□□□□ -1.79
SOX6-216ENST00000533658 ARMS2P0C7Q2 107 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms