RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 TRBV6-5A0A0K0K1A5 114 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 ID1P41134 155 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 MTURNQ8N3F0 131 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 ZNF580Q9UK33 172 aa11.52□□□□□ -0.57
USP35-206ENST00000530535 IGHV3-16A0A0C4DH30 117 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 SDHAF1A6NFY7 115 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 PSMB8P28062 276 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 TSPEAR-AS2P59090 65 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 SMR3AQ99954 134 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 A0A0J9YY99 117 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
USP35-206ENST00000530535 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 KIR2DL4Q99706 377 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 SPAG8Q99932 426 aaPredicted RBP11.5□□□□□ -0.57
USP35-206ENST00000530535 A6NJY4 79 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 TMEM86BQ8N661 226 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 AMELXQ99217 191 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
USP35-206ENST00000530535 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
USP35-206ENST00000530535 F5H697 171 aa11.49□□□□□ -0.57
USP35-206ENST00000530535 TSPAN13O95857 204 aa11.49□□□□□ -0.57
USP35-206ENST00000530535 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
USP35-206ENST00000530535 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
USP35-206ENST00000530535 MRPL16Q9NX20 251 aaKnown RBP11.49□□□□□ -0.57
USP35-206ENST00000530535 A0A0J9YX75 114 aa11.48□□□□□ -0.57
USP35-206ENST00000530535 M0QY20 66 aa11.48□□□□□ -0.57
USP35-206ENST00000530535 LY6G6DO95868 133 aa11.48□□□□□ -0.57
USP35-206ENST00000530535 HERVK_113P61574 105 aa11.48□□□□□ -0.57
USP35-206ENST00000530535 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
USP35-206ENST00000530535 SRSF9Q13242 221 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP35-206ENST00000530535 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
USP35-206ENST00000530535 FAM74A4Q5TZK3 123 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 Q8N1Y9 231 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 K7EQG2 157 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 INSL3P51460 131 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 UBE2D3P61077 147 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 UBE2D2P62837 147 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 CFAP126Q5VTH2 177 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 SPATA25Q9BR10 227 aa11.47□□□□□ -0.57
USP35-206ENST00000530535 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
USP35-206ENST00000530535 IGHV3-30P01768 117 aa11.46□□□□□ -0.57
USP35-206ENST00000530535 IGHV3-30-5P0DP03 117 aa11.46□□□□□ -0.57
USP35-206ENST00000530535 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.57
USP35-206ENST00000530535 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 P0DMU3 169 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 FAM231AP0DMU4 169 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 FAM231CP0DMU5 169 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 AZU1P20160 251 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 SLC25A29Q8N8R3 303 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
USP35-206ENST00000530535 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 ZNF256Q9Y2P7 627 aaPredicted RBP11.45□□□□□ -0.58
USP35-206ENST00000530535 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 J3QR89 54 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 RHOHQ15669 191 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
USP35-206ENST00000530535 ZNF56Q15929 161 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 SYT8Q8NBV8 401 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 SIGMAR1Q99720 223 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
USP35-206ENST00000530535 IGHV1OR15-1A0A075B7D0 117 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 APOMO95445 188 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 SPINK13Q1W4C9 94 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 Q8N2B8 174 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
USP35-206ENST00000530535 J3QQQ9 107 aa11.43□□□□□ -0.58
USP35-206ENST00000530535 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
USP35-206ENST00000530535 CFC1P0CG37 223 aa11.43□□□□□ -0.58
USP35-206ENST00000530535 SNRPD3P62318 126 aaKnown RBP11.43□□□□□ -0.58
USP35-206ENST00000530535 SFTA2Q6UW10 78 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
USP35-206ENST00000530535 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 MTORP42345 2549 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 TMEM223A0PJW6 202 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 SCGB1A1P11684 91 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 C1QTNF4Q9BXJ3 329 aa11.42□□□□□ -0.58
USP35-206ENST00000530535 HIVEP2P31629 2446 aa11.41□□□□□ -0.58
USP35-206ENST00000530535 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
USP35-206ENST00000530535 NF1P21359 2839 aa11.41□□□□□ -0.58
USP35-206ENST00000530535 FLNBO75369 2602 aaKnown RBP11.41□□□□□ -0.58
USP35-206ENST00000530535 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
USP35-206ENST00000530535 PSMB2P49721 201 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms