RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 DAND5Q8N907 189 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 A0A1B0GX51 115 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 TCL1BO95988 128 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 TMEM258P61165 79 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 Q6ZUT4 128 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 PCNX3Q9H6A9 2034 aa11.79□□□□□ -0.52
PCDHA4-203ENST00000530339 A6NDX4 124 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 LRRC75A-AS1Q8N1F1 130 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 A0A096LPF7 62 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 CLEC2BQ92478 149 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 C1orf229Q6ZS94 237 aaPredicted RBP11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
PCDHA4-203ENST00000530339 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.52
PCDHA4-203ENST00000530339 A0A087WW49 117 aa11.77□□□□□ -0.52
PCDHA4-203ENST00000530339 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.52
PCDHA4-203ENST00000530339 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.52
PCDHA4-203ENST00000530339 COX7A2LO14548 114 aa11.77□□□□□ -0.53
PCDHA4-203ENST00000530339 PTPRQQ9UMZ3 2332 aa11.77□□□□□ -0.53
PCDHA4-203ENST00000530339 IGHV3-30-3P0DP02 117 aa11.77□□□□□ -0.53
PCDHA4-203ENST00000530339 ADAMTS9Q9P2N4 1935 aa11.77□□□□□ -0.53
PCDHA4-203ENST00000530339 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 J3KT08 172 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 DEFB1P60022 68 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 DEFB136Q30KP8 78 aa11.76□□□□□ -0.53
PCDHA4-203ENST00000530339 A0A0J9YX75 114 aa11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 TNFRSF13BO14836 293 aaPredicted RBP11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 GYPEP15421 78 aa11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 A0A0J9YY99 117 aa11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
PCDHA4-203ENST00000530339 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 Q9HAA7 133 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 JMJD7-PLA2G4BH0Y9G9 81 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 RNF183Q96D59 192 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 MDFICQ9P1T7 246 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 MT-ATP8P03928 68 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 IGKV2D-26A0A0A0MRZ7 120 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 WISP2O76076 250 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 IGF1P05019 195 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 MIAQ16674 131 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 UNQ9165/PRO28630Q6UXU0 137 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 Q8NA96 180 aa11.73□□□□□ -0.53
PCDHA4-203ENST00000530339 LECT2O14960 151 aa11.72□□□□□ -0.53
PCDHA4-203ENST00000530339 U3KQK5 164 aa11.72□□□□□ -0.53
PCDHA4-203ENST00000530339 EBI3Q14213 229 aa11.72□□□□□ -0.53
PCDHA4-203ENST00000530339 TMEM263Q8WUH6 116 aaKnown RBP11.72□□□□□ -0.53
PCDHA4-203ENST00000530339 CRYGBP07316 175 aa11.72□□□□□ -0.53
PCDHA4-203ENST00000530339 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.53
PCDHA4-203ENST00000530339 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCDHA4-203ENST00000530339 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.53
PCDHA4-203ENST00000530339 Q6ZQT7 251 aa11.71□□□□□ -0.53
PCDHA4-203ENST00000530339 PRORYQ9H606 182 aa11.71□□□□□ -0.53
PCDHA4-203ENST00000530339 PCDH15Q96QU1 1955 aa11.71□□□□□ -0.54
PCDHA4-203ENST00000530339 A0A0J9YXY3 114 aa11.71□□□□□ -0.54
PCDHA4-203ENST00000530339 PSMB8P28062 276 aa11.71□□□□□ -0.54
PCDHA4-203ENST00000530339 CRIP1P50238 77 aa11.71□□□□□ -0.54
PCDHA4-203ENST00000530339 PRR14LQ5THK1 2151 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 DSCAML1Q8TD84 2053 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 hADV29S1A0JD25 119 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 CCDC140Q96MF4 163 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
PCDHA4-203ENST00000530339 MAPKAPK5-AS1Q8N8E1 139 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 ACACBO00763 2458 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 NFE4Q86UQ8 179 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 NDUFA1O15239 70 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 LMO4P61968 165 aa11.69□□□□□ -0.54
PCDHA4-203ENST00000530339 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
PCDHA4-203ENST00000530339 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
PCDHA4-203ENST00000530339 TIRAPP58753 221 aa11.68□□□□□ -0.54
PCDHA4-203ENST00000530339 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
PCDHA4-203ENST00000530339 PDE6GP18545 87 aa11.67□□□□□ -0.54
PCDHA4-203ENST00000530339 H7C423 109 aa11.67□□□□□ -0.54
PCDHA4-203ENST00000530339 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
PCDHA4-203ENST00000530339 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 NUP210LQ5VU65 1888 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 LINC00310P59036 64 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 LY6LH3BQJ8 138 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 C4orf48Q5BLP8 95 aa11.66□□□□□ -0.54
PCDHA4-203ENST00000530339 CITED2Q99967 270 aaPredicted RBP11.65□□□□□ -0.54
PCDHA4-203ENST00000530339 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms