RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 MRM2Q9UI43 246 aaKnown RBP-1.15□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SERPINA10Q9UK55 444 aa-1.15□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PSME2Q9UL46 239 aa-1.15□□□□□ -2.59
SCARNA20.2-201ENST00000516052 AK6Q9Y3D8 172 aaKnown RBP-1.15□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PTRH2Q9Y3E5 179 aaKnown RBP-1.15□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PEG3Q9GZU2 1588 aa-1.16□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TRBV27A0A0K0K1C4 114 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LRRC30A6NM36 301 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CCDC169A6NNP5 214 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 EVPLLA8MZ36 301 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 E9PMD0 336 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 H3BMG7 143 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CHKB-CPT1BH3BT56 60 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MPHOSPH10O00566 681 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MRASO14807 208 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PPP1R2P9O14990 202 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 EDF1O60869 148 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TNFSF15O95150 251 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 SFT2D2O95562 160 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PTHP01270 115 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 HLA-DRAP01903 254 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 APOA1P02647 267 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 S100A8P05109 93 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MYL1P05976 194 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LDHBP07195 334 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MYL3P08590 195 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 IGLC1P0CG04 106 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 GSTT2P0CG29 244 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 GSTT2BP0CG30 244 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 UBL4AP11441 157 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 HIST1H1DP16402 221 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ARF4P18085 180 aaPredicted RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 IL10P22301 178 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PSMA2P25787 234 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 HMGB2P26583 209 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 GCH1P30793 250 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 RAB28P51157 221 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MFAP1P55081 439 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ATP5J2P56134 94 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ARF3P61204 181 aaPredicted RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MAXP61244 160 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 SNRPD2P62316 118 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ARF1P84077 181 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 FABP5Q01469 135 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ANKRD1Q15327 319 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TDRG1Q3Y452 100 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PSMG4Q5JS54 123 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TPTE2P1Q5T6R2 138 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CST9Q5W186 159 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TAS2R42Q7RTR8 314 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LINC00305Q7Z4B0 112 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 VTCN1Q7Z7D3 282 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NPM2Q86SE8 214 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 C10orf107Q8IVU9 208 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 SLC35F2Q8IXU6 374 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 SYS1Q8N2H4 156 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NATD1Q8N6N6 113 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 FAM133AQ8N9E0 248 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 MCFD2Q8NI22 146 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CXorf40AQ8TE69 158 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 FAM3CQ92520 227 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NINJ1Q92982 152 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NT5C3BQ969T7 300 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CCDC47Q96A33 483 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 HIST1H2BLQ99880 126 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NIPSNAP3BQ9BS92 247 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TMEM43Q9BTV4 400 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 C20orf24Q9BUV8 137 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 EFCAB11Q9BUY7 163 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TMEM133Q9H2Q1 129 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 OR51M1Q9H341 326 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 C6orf48Q9UBA6 75 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PFDN2Q9UHV9 154 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LSM7Q9UK45 103 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 SNX6Q9UNH7 406 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LINC00312Q9Y6C7 94 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 DDX60LQ5H9U9 1706 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TARBP1Q13395 1621 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 CC2D2AQ9P2K1 1620 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ANKARQ7Z5J8 1434 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 RRBP1Q9P2E9 1410 aaKnown RBP-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 C5P01031 1676 aa-1.16□□□□□ -2.6
SCARNA20.2-201ENST00000516052 LRRC9Q6ZRR7 1453 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 RAPGEF2Q9Y4G8 1499 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 A0A087WV62 115 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 DEFB131BA0A096LNP1 70 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 KRT87PA6NCN2 255 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 A6NDN8 102 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 C8orf87E5RJ46 101 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 K7EPI3 171 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 M0R2Z0 102 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 PSMD11O00231 422 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 DFFAO00273 331 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 GOSR2O14653 212 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 TPD52L2O43399 206 aaKnown RBP-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 NDUFB3O43676 98 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 STX6O43752 255 aa-1.17□□□□□ -2.6
SCARNA20.2-201ENST00000516052 ATP5LO75964 103 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms