RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 A8MWL6 223 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 M0QY20 66 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 CACNG7P62955 275 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 GAGE1Q13065 139 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 GAGE4Q13068 117 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 GAGE5Q13069 117 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 GAGE13Q4V321 117 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 SUMO4Q6EEV6 95 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 WDR73Q6P4I2 378 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 GFRA4Q9GZZ7 299 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 CARHSP1Q9Y2V2 147 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 RYR1P21817 5038 aa5.93□□□□□ -1.46
PDLIM5-213ENST00000509357 F2Z2F3 143 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 F8W036 122 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 K7EP13 123 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 RHODO00212 210 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 PSCAO43653 123 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 IGHV3-33P01772 117 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 DNAH10OSP0CZ25 163 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 TIRAPP58753 221 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 GATD1Q8NB37 220 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 AP1S3Q96PC3 154 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 SEC11CQ9BY50 192 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 GTSF1LQ9H1H1 148 aa5.92□□□□□ -1.46
PDLIM5-213ENST00000509357 XKRY2A2RUG3 117 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 FAM231BA6NCW3 169 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 MGPP08493 103 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 RPS10P46783 165 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 RAB4BP61018 213 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 UBE2D3P61077 147 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 UBE2D2P62837 147 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 TWIST1Q15672 202 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 ZNF56Q15929 161 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 LELP1Q5T871 98 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 ATRAIDQ6UW56 229 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 AMN1Q8IY45 258 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 C15orf54Q8N8G6 183 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 DEFB104AQ8WTQ1 72 aa5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-213ENST00000509357 A0A1B0GUT8 65 aa5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 SMKR1H3BMG3 65 aa5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 PNRC1Q12796 327 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 DPH3P1Q9H4G8 78 aa5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 Q9HAA7 133 aa5.9□□□□□ -1.46
PDLIM5-213ENST00000509357 HSPG2P98160 4391 aa5.9□□□□□ -1.47
PDLIM5-213ENST00000509357 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 A0A087WWC5 75 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 RAB4AP20338 218 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 LINC01556Q5JQF7 62 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 MRPL54Q6P161 138 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 KCNIP4Q6PIL6 250 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 TMEM191AQ9H0A3 160 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 PGPEP1Q9NXJ5 209 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 URGCP-MRPS24S4R325 110 aa5.89□□□□□ -1.47
PDLIM5-213ENST00000509357 TRBV7-3A0A075B6L6 115 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 TRBV10-1A0A0K0K1A3 114 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 C7orf77A4D0Y5 90 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 F5H697 171 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 NCR2O95944 276 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 TRGC1P0CF51 173 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 SMIM17P0DL12 118 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 FUSP35637 526 aaKnown RBP eCLIP5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 RPL36AP83881 106 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 NRACQ8N912 160 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 RPL36ALQ969Q0 106 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-213ENST00000509357 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 A0A087WTM6 91 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 IBA57-AS1B1ANH7 110 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 CAMPP49913 170 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 MRPL51Q4U2R6 128 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 ANAPC16Q96DE5 110 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 YPEL4Q96NS1 127 aa5.87□□□□□ -1.47
PDLIM5-213ENST00000509357 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 A0A087WX48 190 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 MT-ND4LP03901 98 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 FAM104BQ5XKR9 115 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 RASL11AQ6T310 242 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 TM2D2Q9BX73 214 aa5.86□□□□□ -1.47
PDLIM5-213ENST00000509357 TRAV8-3A0A0A6YYJ7 113 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 PPP1R2P9O14990 202 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 APOC3P02656 99 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 HBBP68871 147 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 RIGQ13278 110 aa5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 DAZ4Q86SG3 579 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 NIT2Q9NQR4 276 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms