RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 COX19Q49B96 90 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 LYPD5Q6UWN5 251 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 LINC00588Q9Y4M8 146 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 DNAH10OSP0CZ25 163 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 EMP1P54849 157 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 ICOSQ9Y6W8 199 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 GAS8-AS1O95177 125 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 NCR2O95944 276 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 HTN1P15515 57 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 ESRGQ1W209 222 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 SPANXN1Q5VSR9 72 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 TRBV7-3A0A075B6L6 115 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 FAM104AQ969W3 186 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 C20orf78Q9BR46 151 aa5.66□□□□□ -1.5
CDC42SE2-208ENST00000505065 LOC100131303A0A0U1RQF7 123 aa5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 COLCA2A8K830 154 aa5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 DAZ4Q86SG3 579 aaKnown RBP5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 NIT2Q9NQR4 276 aa5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 DAZ3Q9NR90 486 aaKnown RBP5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 ESDP10768 282 aa5.65□□□□□ -1.5
CDC42SE2-208ENST00000505065 S100A8P05109 93 aa5.65□□□□□ -1.51
CDC42SE2-208ENST00000505065 TWIST1Q15672 202 aa5.65□□□□□ -1.51
CDC42SE2-208ENST00000505065 MRPL23Q16540 153 aaKnown RBP5.65□□□□□ -1.51
CDC42SE2-208ENST00000505065 IQCJQ1A5X6 159 aa5.65□□□□□ -1.51
CDC42SE2-208ENST00000505065 A0A087WWL8 130 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 PAX4O43316 350 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 PPBPP02775 128 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 H7C423 109 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 P0DMU3 169 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 FAM231AP0DMU4 169 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 FAM231CP0DMU5 169 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 LELP1Q5T871 98 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 K7EMI3 77 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 F5H768 121 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 KCNIP4Q6PIL6 250 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 Q6ZRN7 208 aaPredicted RBP5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 AMN1Q8IY45 258 aa5.64□□□□□ -1.51
CDC42SE2-208ENST00000505065 H7C1H1 209 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 TSHBP01222 138 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 MT-ND6P03923 174 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 PPP1R17O96001 155 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 NPSP0C0P6 89 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 GYPEP15421 78 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 RPS10P46783 165 aaKnown RBP5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 TRGV4A0A0C4DH28 118 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 LINC01556Q5JQF7 62 aa5.63□□□□□ -1.51
CDC42SE2-208ENST00000505065 HLA-DQA1P01909 254 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 TMA7Q9Y2S6 64 aaKnown RBP5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 CSDC2Q9Y534 153 aaKnown RBP5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 APOC3P02656 99 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 NEGR1Q7Z3B1 354 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 FAM19A3Q7Z5A8 133 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 SMCO4Q9NRQ5 59 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 MUC21A0A0G2JKD1 596 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 MUC21A0A140T8X8 626 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 A0A1B0GUV1 79 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 KRTAP26-1Q6PEX3 210 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 RPL39LQ96EH5 51 aaKnown RBP5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 URB1-AS1Q96HZ7 61 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 ALKBH7Q9BT30 221 aaPredicted RBP5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 TMEM70Q9BUB7 260 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
CDC42SE2-208ENST00000505065 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 TGIF2-C20orf24A0A0A6YYL0 155 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 BORCS7Q96B45 105 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 TIMM21Q9BVV7 248 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 IGLL5B9A064 214 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 KRTAP1-5Q9BYS1 174 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 RPS10P5Q9NQ39 176 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 LAGE3Q14657 143 aa5.61□□□□□ -1.51
CDC42SE2-208ENST00000505065 ZFAND6Q6FIF0 208 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 S100A1P23297 94 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 PKHD1P08F94 4074 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 TCAPO15273 167 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 SRIP30626 198 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 RPL36ALQ969Q0 106 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 TNFRSF6BO95407 300 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 NPYP01303 97 aa5.6□□□□□ -1.51
CDC42SE2-208ENST00000505065 ZNF56Q15929 161 aa5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 CBLN2Q8IUK8 224 aa5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 SMIM17P0DL12 118 aa5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 SUMO2P61956 95 aaKnown RBP5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 NIT1Q86X76 327 aa5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
CDC42SE2-208ENST00000505065 A0A0J9YY99 117 aa5.59□□□□□ -1.52
CDC42SE2-208ENST00000505065 D6R8Y8 96 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms