RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
FN1-227ENST00000498719 LRRK2Q5S007 2527 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 M0R381 172 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 CRLF1O75462 422 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 SEC11AP67812 179 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
FN1-227ENST00000498719 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 FBN2P35556 2912 aa6.63□□□□□ -1.35
FN1-227ENST00000498719 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 FAM223BA6NKX1 122 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 H3BUX3 64 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 FAM223AQ8IWN6 122 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 H3BUT2 72 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 K7EMI3 77 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 IGKCP01834 107 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 MRPL35Q9NZE8 188 aaKnown RBP6.62□□□□□ -1.35
FN1-227ENST00000498719 MYO9AB2RTY4 2548 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 ABCA12Q86UK0 2595 aa6.62□□□□□ -1.35
FN1-227ENST00000498719 C8orf87E5RJ46 101 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 LINC01619G3V211 115 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 K7ERU9 68 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 HSD52Q0P140 79 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 OCIAD2Q56VL3 154 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 TEX15Q9BXT5 2789 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 IGHV4-30-2A0A087WSY4 118 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 SOCS3O14543 225 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
FN1-227ENST00000498719 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
FN1-227ENST00000498719 A6NDN8 102 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 GNRH2O43555 120 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 RNASE4P34096 147 aaKnown RBP6.6□□□□□ -1.35
FN1-227ENST00000498719 OR4X2Q8NGF9 303 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 RPL39LQ96EH5 51 aaKnown RBP6.6□□□□□ -1.35
FN1-227ENST00000498719 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 TLN2Q9Y4G6 2542 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 IGHV4-4A0A075B6R2 117 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 NDUFA4O00483 81 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 DPM2O94777 84 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
FN1-227ENST00000498719 CRIP2P52943 208 aaPredicted RBP6.6□□□□□ -1.35
FN1-227ENST00000498719 FXYD2P54710 66 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 OR10J6PQ8NGY7 276 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 CCL19Q99731 98 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 PTPN13Q12923 2485 aa6.6□□□□□ -1.35
FN1-227ENST00000498719 TRBV25-1A0A075B6N4 114 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 H3BRM9 83 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 K7ERJ3 54 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 IGHG2P01859 326 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 Q6ZSN1 163 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 MYOZ3Q8TDC0 251 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 C10orf105Q8TEF2 133 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 TRAV8-4A0A0B4J246 113 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 AP1S3Q96PC3 154 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
FN1-227ENST00000498719 TRAV21A0A0B4J279 112 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 A6NDX4 124 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 MGPP08493 103 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 UFSP1Q6NVU6 142 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 C10orf99Q6UWK7 81 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
FN1-227ENST00000498719 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
FN1-227ENST00000498719 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 NF1P21359 2839 aa6.58□□□□□ -1.36
FN1-227ENST00000498719 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 OVOL1O14753 267 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 IGHV4-30-4P0DP06 118 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 ASIPP42127 132 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 JPT2Q9H910 190 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.57□□□□□ -1.36
FN1-227ENST00000498719 ATP5G1P05496 136 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 PFN2P35080 140 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 EMP1P54849 157 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 USMG5Q96IX5 58 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
FN1-227ENST00000498719 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
FN1-227ENST00000498719 MSMBP08118 114 aa6.56□□□□□ -1.36
FN1-227ENST00000498719 ZFAND6Q6FIF0 208 aa6.56□□□□□ -1.36
FN1-227ENST00000498719 SCGB3A1Q96QR1 104 aa6.56□□□□□ -1.36
FN1-227ENST00000498719 DAZ1Q9NQZ3 744 aaKnown RBP6.56□□□□□ -1.36
FN1-227ENST00000498719 K7EP34 96 aa6.56□□□□□ -1.36
FN1-227ENST00000498719 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
FN1-227ENST00000498719 GTF2H5Q6ZYL4 71 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 MAPK1IP1LQ8NDC0 245 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 HIGD1BQ9P298 99 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 IGKV3-20P01619 116 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms