RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 SPG11Q96JI7 2443 aa14.65□□□□□ -0.06
NKX2-1-202ENST00000498187 A8MWV9 139 aa14.65□□□□□ -0.06
NKX2-1-202ENST00000498187 Q5PR19 223 aa14.65□□□□□ -0.06
NKX2-1-202ENST00000498187 SCGB1C2P0DMR2 95 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 SBSPONQ8IVN8 264 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 ZNF580Q9UK33 172 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 IGKV3-20P01619 116 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 CRYBA4P53673 196 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 PTH2Q96A98 100 aa14.64□□□□□ -0.07
NKX2-1-202ENST00000498187 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 DEFB112Q30KQ8 113 aa14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 AMELXQ99217 191 aa14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 KMT2BQ9UMN6 2715 aaPredicted RBP14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 SPINK8P0C7L1 97 aa14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 FAM74A4Q5TZK3 123 aa14.63□□□□□ -0.07
NKX2-1-202ENST00000498187 UTP20O75691 2785 aaKnown RBP14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 IGHV3-16A0A0C4DH30 117 aa14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 RHOHQ15669 191 aa14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 ZNF843Q8N446 348 aa14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 CARD19Q96LW7 228 aa14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 ZNF256Q9Y2P7 627 aaPredicted RBP14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 CSPG4Q6UVK1 2322 aa14.62□□□□□ -0.07
NKX2-1-202ENST00000498187 A0A0J9YX75 114 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 NRGNQ92686 78 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 C9orf85Q96MD7 179 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 MDFICQ9P1T7 246 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 NSUN5P1Q3KNT7 163 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 ODF3Q96PU9 254 aa14.61□□□□□ -0.07
NKX2-1-202ENST00000498187 LEPROTO15243 131 aa14.6□□□□□ -0.07
NKX2-1-202ENST00000498187 DSCR9P59020 149 aa14.6□□□□□ -0.07
NKX2-1-202ENST00000498187 SNRPD3P62318 126 aaKnown RBP14.6□□□□□ -0.07
NKX2-1-202ENST00000498187 Q6ZUT4 128 aa14.6□□□□□ -0.07
NKX2-1-202ENST00000498187 GATA3P23771 443 aa14.6□□□□□ -0.07
NKX2-1-202ENST00000498187 M0QY20 66 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 ZNF56Q15929 161 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 TMEM223A0PJW6 202 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 K7EQG2 157 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 FHL3Q13643 280 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 TRPT1Q86TN4 253 aaKnown RBP14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 Q8N1Y9 231 aa14.59□□□□□ -0.07
NKX2-1-202ENST00000498187 MT-ATP8P03928 68 aa14.58□□□□□ -0.08
NKX2-1-202ENST00000498187 A4D1N5 150 aa14.58□□□□□ -0.08
NKX2-1-202ENST00000498187 SPINK13Q1W4C9 94 aa14.58□□□□□ -0.08
NKX2-1-202ENST00000498187 FAM208BQ5VWN6 2430 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 DOPEY1Q5JWR5 2465 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 XGP55808 180 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 SYNJ2BPP57105 145 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 GEMIN7Q9H840 131 aaKnown RBP14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 MAP1AP78559 2803 aaPredicted RBP14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 TMEM262E9PQX1 116 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 ANKRD29Q8N6D5 301 aa14.57□□□□□ -0.08
NKX2-1-202ENST00000498187 LRRK2Q5S007 2527 aa14.56□□□□□ -0.08
NKX2-1-202ENST00000498187 IGHV1OR15-1A0A075B7D0 117 aa14.56□□□□□ -0.08
NKX2-1-202ENST00000498187 TMEM89A2RUT3 159 aa14.56□□□□□ -0.08
NKX2-1-202ENST00000498187 A0A0B4J2C4 111 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 M0QXV9 152 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 TGFAP01135 160 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 LINC01356Q8N9X3 169 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 C20orf203Q8NBC4 194 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 OPRPNQ99935 248 aaPredicted RBP14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 UBR5O95071 2799 aaPredicted RBP14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 CELSR2Q9HCU4 2923 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 RHODO00212 210 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 IGHV3-33P01772 117 aa14.55□□□□□ -0.08
NKX2-1-202ENST00000498187 I3L3M4 83 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 SLC25A20O43772 301 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 TMEM263Q8WUH6 116 aaKnown RBP14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 DUX5Q96PT3 197 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 TRAV2A0A0B4J234 112 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 P0DMU3 169 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 FAM231AP0DMU4 169 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 FAM231CP0DMU5 169 aa14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 ZNF22P17026 224 aaPredicted RBP14.54□□□□□ -0.08
NKX2-1-202ENST00000498187 CRYBG3Q68DQ2 2970 aa14.53□□□□□ -0.08
NKX2-1-202ENST00000498187 MUSTN1Q8IVN3 82 aa14.53□□□□□ -0.08
NKX2-1-202ENST00000498187 MAPK1IP1LQ8NDC0 245 aa14.52□□□□□ -0.08
NKX2-1-202ENST00000498187 C9JAW5 83 aa14.52□□□□□ -0.09
NKX2-1-202ENST00000498187 A0A0J9YXV3 536 aa14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 HOXD3P31249 432 aaPredicted RBP14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 DOPEY2Q9Y3R5 2298 aa14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 IGLV4-3A0A075B6K6 122 aa14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 IGHV3-64A0A075B6Q5 118 aa14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 EIF4EBP3O60516 100 aaPredicted RBP14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 SORL1Q92673 2214 aa14.5□□□□□ -0.09
NKX2-1-202ENST00000498187 M0R2P5 195 aa14.49□□□□□ -0.09
NKX2-1-202ENST00000498187 TRAV26-1A0A087WT03 109 aa14.49□□□□□ -0.09
NKX2-1-202ENST00000498187 A0A096LNT2 108 aa14.49□□□□□ -0.09
NKX2-1-202ENST00000498187 H7C2G1 150 aa14.49□□□□□ -0.09
NKX2-1-202ENST00000498187 VPREB3Q9UKI3 123 aa14.49□□□□□ -0.09
NKX2-1-202ENST00000498187 ATXN8Q156A1 80 aa14.48□□□□□ -0.09
NKX2-1-202ENST00000498187 Q1RN00 199 aa14.48□□□□□ -0.09
NKX2-1-202ENST00000498187 J3QLI3 93 aa14.48□□□□□ -0.09
NKX2-1-202ENST00000498187 ELANEP08246 267 aa14.48□□□□□ -0.09
NKX2-1-202ENST00000498187 TRGV11A0A075B6L2 103 aa14.47□□□□□ -0.09
NKX2-1-202ENST00000498187 A0A0J9YXY3 114 aa14.47□□□□□ -0.09
NKX2-1-202ENST00000498187 ZNF702PQ9H963 129 aa14.47□□□□□ -0.09
NKX2-1-202ENST00000498187 UBE2E2Q96LR5 201 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms