RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 ACYP1P07311 99 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 CXCL8P10145 99 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 PRB4P10163 310 aaPredicted RBP1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 SMIM11AP58511 58 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 SLC48A1Q6P1K1 146 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 CASC2Q6XLA1 102 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 Q6ZQT0 140 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 CYP2G1PQ6ZSU1 146 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 SPTSSBQ8NFR3 76 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 C20orf166-AS1Q96NR2 134 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 CYSTM1Q9H1C7 97 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 KIDINS220Q9ULH0 1771 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 CDK12Q9NYV4 1490 aaPredicted RBP1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 NRXN1Q9ULB1 1477 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 PATJQ8NI35 1801 aa1.87□□□□□ -2.11
NCKAP1-208ENST00000495619 COL5A3P25940 1745 aaPredicted RBP1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 SHANK3Q9BYB0 1731 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 PLXNC1O60486 1568 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 TIAM1Q13009 1591 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 DIP2CQ9Y2E4 1556 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 LCTP09848 1927 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 LAMB4A4D0S4 1761 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 TRAV13-2A0A0B4J235 113 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 A0A0G2JND7 137 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 TCRBV4S1A1TA0A5B7 111 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 CLPSP04118 112 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 CTSGP08311 255 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 NNATQ16517 81 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 C9orf116Q5BN46 136 aaPredicted RBP1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 SMIM5Q71RC9 77 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 C14orf132Q9NPU4 83 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 MANBALQ9NQG1 85 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 IQSEC2Q5JU85 1478 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 LRRC9Q6ZRR7 1453 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 PLXNA3P51805 1871 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 NWD2Q9ULI1 1742 aa1.86□□□□□ -2.11
NCKAP1-208ENST00000495619 MICAL3Q7RTP6 2002 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 IGKV1D-42A0A075B6H8 117 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 TRBV10-3A0A0K0K1G6 114 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 C11orf86A6NJI1 115 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 EFNA4P52798 201 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 ZNF56Q15929 161 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 LYPD5Q6UWN5 251 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 LINC00643Q86TS7 51 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 LINC01600Q96MT4 127 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 CYP4F30PQ9H0H9 118 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 FAM215AQ9Y5M1 114 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 SHANK2Q9UPX8 1470 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 KCPQ6ZWJ8 1503 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 CLASP1Q7Z460 1538 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 SYCP2Q9BX26 1530 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 A0A1B0GUL6 1792 aa1.85□□□□□ -2.11
NCKAP1-208ENST00000495619 DOCK2Q92608 1830 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 RAPGEF6Q8TEU7 1601 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 KIF1AQ12756 1690 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 PTPRDP23468 1912 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 COL24A1Q17RW2 1714 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 IGHV1-18A0A0C4DH31 117 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 H7BZZ5 65 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 BCE1O60756 84 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 XAF1Q6GPH4 301 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 LRRC7Q96NW7 1537 aa1.84□□□□□ -2.11
NCKAP1-208ENST00000495619 UNC13BO14795 1591 aa1.84□□□□□ -2.12
NCKAP1-208ENST00000495619 ABCA6Q8N139 1617 aa1.84□□□□□ -2.12
NCKAP1-208ENST00000495619 RNF17Q9BXT8 1623 aaKnown RBP1.84□□□□□ -2.12
NCKAP1-208ENST00000495619 GREB1Q4ZG55 1949 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 USP54Q70EL1 1684 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 SORL1Q92673 2214 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 EXPH5Q8NEV8 1989 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 TRPM3Q9HCF6 1732 aaPredicted RBP1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 SCN3AQ9NY46 2000 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 DISP1Q96F81 1524 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 E7EUB6 86 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 COX8AP10176 69 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 DSCR4P56555 118 aaPredicted RBP1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 ZNF826PQ6ZT77 177 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 FAM223AQ8IWN6 122 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 TMEM254Q8TBM7 123 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 MINOS1-NBL1R4GNA1 71 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 LAMC1P11047 1609 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 PTPRSQ13332 1948 aa1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 CLTCQ00610 1675 aaKnown RBP1.83□□□□□ -2.12
NCKAP1-208ENST00000495619 RGPD2P0DJD1 1756 aa1.82□□□□□ -2.12
NCKAP1-208ENST00000495619 KDM3BQ7LBC6 1761 aa1.82□□□□□ -2.12
NCKAP1-208ENST00000495619 NUMA1Q14980 2115 aa1.82□□□□□ -2.12
NCKAP1-208ENST00000495619 C1orf167Q5SNV9 1468 aa1.82□□□□□ -2.12
NCKAP1-208ENST00000495619 PLXNA2O75051 1894 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms