RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 DENND4CQ5VZ89 1909 aa12.42□□□□□ -0.42
BRAT1-206ENST00000493232 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
BRAT1-206ENST00000493232 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
BRAT1-206ENST00000493232 FSTL3O95633 263 aa12.42□□□□□ -0.42
BRAT1-206ENST00000493232 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
BRAT1-206ENST00000493232 C14orf177Q52M58 125 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 LGALS9O00182 355 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 DEFB1P60022 68 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 DAND5Q8N907 189 aa12.41□□□□□ -0.42
BRAT1-206ENST00000493232 A0A1B0GX51 115 aa12.4□□□□□ -0.42
BRAT1-206ENST00000493232 P0C879 139 aa12.4□□□□□ -0.42
BRAT1-206ENST00000493232 IGF1P05019 195 aa12.4□□□□□ -0.42
BRAT1-206ENST00000493232 IGKV1D-37A0A075B6S9 117 aa12.4□□□□□ -0.42
BRAT1-206ENST00000493232 LECT2O14960 151 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 C11orf1Q9H5F2 150 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 FXYD2P54710 66 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 ODF1Q14990 250 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 CHKB-CPT1BH3BT56 60 aa12.39□□□□□ -0.43
BRAT1-206ENST00000493232 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
BRAT1-206ENST00000493232 Q6YL49 198 aa12.38□□□□□ -0.43
BRAT1-206ENST00000493232 ATOX1O00244 68 aa12.38□□□□□ -0.43
BRAT1-206ENST00000493232 H3BT86 120 aa12.38□□□□□ -0.43
BRAT1-206ENST00000493232 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
BRAT1-206ENST00000493232 WISP2O76076 250 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 PDE6GP18545 87 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 CDPF1Q6NVV7 123 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 PTPRQQ9UMZ3 2332 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 PSMB8P28062 276 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 TRBV10-2A0A0K0K1G8 114 aa12.37□□□□□ -0.43
BRAT1-206ENST00000493232 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
BRAT1-206ENST00000493232 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
BRAT1-206ENST00000493232 HIGD2BQ4VC39 106 aa12.36□□□□□ -0.43
BRAT1-206ENST00000493232 TMEM256-PLSCR3K7ERE1 68 aa12.36□□□□□ -0.43
BRAT1-206ENST00000493232 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 DYSFO75923 2080 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 UFSP1Q6NVU6 142 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 PRO3102Q9H379 93 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
BRAT1-206ENST00000493232 COX7BP24311 80 aa12.34□□□□□ -0.43
BRAT1-206ENST00000493232 IGKV3D-7A0A0C4DH55 119 aa12.34□□□□□ -0.43
BRAT1-206ENST00000493232 Q6ZUT4 128 aa12.34□□□□□ -0.43
BRAT1-206ENST00000493232 SMIM20Q8N5G0 67 aa12.34□□□□□ -0.43
BRAT1-206ENST00000493232 K7EQG2 157 aa12.34□□□□□ -0.43
BRAT1-206ENST00000493232 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 TDRG1Q3Y452 100 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 TECTAO75443 2155 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 H7C423 109 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
BRAT1-206ENST00000493232 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
BRAT1-206ENST00000493232 MIAQ16674 131 aa12.32□□□□□ -0.44
BRAT1-206ENST00000493232 Q6ZTI0 123 aa12.32□□□□□ -0.44
BRAT1-206ENST00000493232 DEFB114Q30KQ6 69 aa12.32□□□□□ -0.44
BRAT1-206ENST00000493232 KIF26AQ9ULI4 1882 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-206ENST00000493232 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
BRAT1-206ENST00000493232 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-206ENST00000493232 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
BRAT1-206ENST00000493232 LINC01548A6NM66 108 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 PLA2G5P39877 138 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 IGLC6P0CF74 106 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 REG3AQ06141 175 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 EBI3Q14213 229 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
BRAT1-206ENST00000493232 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
BRAT1-206ENST00000493232 PROP1O75360 226 aa12.3□□□□□ -0.44
BRAT1-206ENST00000493232 FAM222AQ5U5X8 452 aa12.3□□□□□ -0.44
BRAT1-206ENST00000493232 HILS1P60008 231 aa12.3□□□□□ -0.44
BRAT1-206ENST00000493232 CHD3Q12873 2000 aaKnown RBP12.29□□□□□ -0.44
BRAT1-206ENST00000493232 ACACBO00763 2458 aa12.29□□□□□ -0.44
BRAT1-206ENST00000493232 WFDC2Q14508 124 aa12.29□□□□□ -0.44
BRAT1-206ENST00000493232 TAX1BP3O14907 124 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 C5orf47Q569G3 176 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 FOXI1Q12951 378 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
BRAT1-206ENST00000493232 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 FAM236AA0A1B0GUQ0 79 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 FAM236BA0A1B0GV22 79 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 PLCE1Q9P212 2302 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 CRYGBP07316 175 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
BRAT1-206ENST00000493232 COL4A3Q01955 1670 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 B5MCH6 92 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 IGLV2-8P01709 118 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 SPATA25Q9BR10 227 aa12.27□□□□□ -0.44
BRAT1-206ENST00000493232 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
BRAT1-206ENST00000493232 MLST8Q9BVC4 326 aa12.26□□□□□ -0.45
BRAT1-206ENST00000493232 A0A0J9YXY3 114 aa12.26□□□□□ -0.45
BRAT1-206ENST00000493232 HIST2H2BDQ6DRA6 164 aa12.26□□□□□ -0.45
BRAT1-206ENST00000493232 RNF183Q96D59 192 aa12.26□□□□□ -0.45
BRAT1-206ENST00000493232 P0DMU3 169 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms