RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-232ENST00000489053 DAZ3Q9NR90 486 aaKnown RBP6.14□□□□□ -1.43
HDAC6-232ENST00000489053 TMEM250H0YL14 139 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 GCSHP23434 173 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 TWIST1Q15672 202 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 NIT1Q86X76 327 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 NEXN-AS1Q8NBZ9 246 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
HDAC6-232ENST00000489053 Q9UF83 564 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 KLK12Q9UKR0 248 aa6.13□□□□□ -1.43
HDAC6-232ENST00000489053 RYR1P21817 5038 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 TRBV25-1A0A075B6N4 114 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 TRBV6-8A0A0A6YYG3 113 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 IGLV2-8P01709 118 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
HDAC6-232ENST00000489053 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC6-232ENST00000489053 Q0VG73 95 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 Q8N3U1 123 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 DNAJC30Q96LL9 226 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 DPH3P1Q9H4G8 78 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 HSPG2P98160 4391 aa6.12□□□□□ -1.43
HDAC6-232ENST00000489053 UBE2L6O14933 153 aa6.11□□□□□ -1.43
HDAC6-232ENST00000489053 GATCO43716 136 aaKnown RBP6.11□□□□□ -1.43
HDAC6-232ENST00000489053 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
HDAC6-232ENST00000489053 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-232ENST00000489053 Q8N814 137 aa6.11□□□□□ -1.43
HDAC6-232ENST00000489053 C15orf54Q8N8G6 183 aa6.11□□□□□ -1.43
HDAC6-232ENST00000489053 SMIM7Q9BQ49 75 aa6.11□□□□□ -1.43
HDAC6-232ENST00000489053 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
HDAC6-232ENST00000489053 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
HDAC6-232ENST00000489053 TRBV20OR9-2A0A075B6H5 130 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 IGHV1-24A0A0C4DH33 117 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 A8MWL6 223 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 LECT2O14960 151 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 NTF3P20783 257 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 SUMO4Q6EEV6 95 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 RASL11AQ6T310 242 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 OCC1Q8TAD7 63 aa6.1□□□□□ -1.43
HDAC6-232ENST00000489053 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
HDAC6-232ENST00000489053 CTRLP40313 264 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 GAGE6Q13070 117 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 C14orf177Q52M58 125 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 WDR73Q6P4I2 378 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 Q8N1X5 172 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 Q8N976 141 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 FRZBQ92765 325 aa6.09□□□□□ -1.43
HDAC6-232ENST00000489053 LRCOL1A6NCL2 159 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 ZNF727A8MUV8 499 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 EPM2AB3EWF7 344 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 M0QY20 66 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 COTL1Q14019 142 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 MPV17L2Q567V2 206 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 TEX261Q6UWH6 196 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 TMEM243Q9BU79 118 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 NIT2Q9NQR4 276 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 KIF25-AS1Q9Y6Z4 181 aa6.08□□□□□ -1.44
HDAC6-232ENST00000489053 A0A1B0GVG6 124 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 K7EN84 100 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 AMTP48728 403 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 MIAQ16674 131 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 CLPSL2Q6UWE3 100 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 FAM231DQ6ZW35 169 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 FAM210AQ96ND0 272 aa6.07□□□□□ -1.44
HDAC6-232ENST00000489053 FAM229AH3BQW9 127 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 RBX1P62877 108 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 PEA15Q15121 130 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 IQCJQ1A5X6 159 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 FAM74A3Q4VXF1 159 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 CT83Q5H943 113 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 AMMECR1LQ6DCA0 310 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 ATRAIDQ6UW56 229 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 LINC00269Q8N2A0 174 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 LYPD6BQ8NI32 183 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 TMEM70Q9BUB7 260 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
HDAC6-232ENST00000489053 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 A0A1B0GUT8 65 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 ADIRFQ15847 76 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 TMEM241Q24JQ0 296 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 TSKUQ8WUA8 353 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 GTSF1Q8WW33 167 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 CNFNQ9BYD5 112 aa6.05□□□□□ -1.44
HDAC6-232ENST00000489053 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 HIGD1CA8MV81 97 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 NDUFS6O75380 124 aaKnown RBP6.04□□□□□ -1.44
HDAC6-232ENST00000489053 APCSP02743 223 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 SRP19P09132 144 aaKnown RBP6.04□□□□□ -1.44
HDAC6-232ENST00000489053 RIGQ13278 110 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 NTM-AS1Q6ZSK4 140 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 LINC01551Q86U37 167 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms