RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 IGLV1-51P01701 117 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 MAP1LC3AQ9H492 121 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 DPH3P1Q9H4G8 78 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 NDUFA11Q86Y39 141 aa6.46□□□□□ -1.37
CDC42SE1-204ENST00000483763 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.37
CDC42SE1-204ENST00000483763 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 F8WDY8 70 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 MGPP08493 103 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 C5orf47Q569G3 176 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 Q6ZN92 141 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 AP1S3Q96PC3 154 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 XCL2Q9UBD3 114 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 CMYA5Q8N3K9 4069 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
CDC42SE1-204ENST00000483763 TIRAPP58753 221 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 DEFB125Q8N687 156 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 SS18L2Q9UHA2 77 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 CRYGDP07320 174 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 FAM74A4Q5TZK3 123 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 DEFB104AQ8WTQ1 72 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 TMEM158Q8WZ71 300 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
CDC42SE1-204ENST00000483763 ZNF876PQ49A33 203 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 Q6ZVH6 145 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 TRPT1Q86TN4 253 aaKnown RBP6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 LINC00482Q8N8I6 264 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 Q8N8P6 123 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 G3V4G9 280 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 HBDP02042 147 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 GIG44P09565 113 aaPredicted RBP6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 SUMO2P61956 95 aaKnown RBP6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 STHQ8IWL8 128 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 C18orf15Q96N68 181 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 MAP1LC3CQ9BXW4 147 aa6.44□□□□□ -1.38
CDC42SE1-204ENST00000483763 AZU1P20160 251 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 RPL32P62910 135 aaKnown RBP6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 BEAN1Q3B7T3 259 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 C1orf158Q8N1D5 194 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 C11orf72Q8NBR9 251 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 MGAM2Q2M2H8 2515 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 IGLL1P15814 213 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 HINT1P49773 126 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 LINC01587Q99440 93 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 SMIM2Q9BVW6 85 aa6.43□□□□□ -1.38
CDC42SE1-204ENST00000483763 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 IGHV3OR16-12A0A075B7B8 117 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 F5H697 171 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 SMIM17P0DL12 118 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 FCER1GP30273 86 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 LINC01545Q5VT33 79 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 MORN3Q6PF18 240 aaPredicted RBP6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 SMIM20Q8N5G0 67 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 SIGMAR1Q99720 223 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 Q9UF83 564 aa6.42□□□□□ -1.38
CDC42SE1-204ENST00000483763 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 TRAV9-2A0A087WT02 112 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 IGHV3-73A0A0B4J1V6 119 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 M0QY20 66 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 INSP01308 110 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 LAGE3Q14657 143 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 C20orf78Q9BR46 151 aa6.41□□□□□ -1.38
CDC42SE1-204ENST00000483763 RPL35AP18077 110 aaKnown RBP6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 VAMP3Q15836 100 aa6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 CDIP1Q9H305 208 aa6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 NACAE9PAV3 2078 aa6.4□□□□□ -1.38
CDC42SE1-204ENST00000483763 TAX1BP3O14907 124 aa6.4□□□□□ -1.39
CDC42SE1-204ENST00000483763 ZNF56Q15929 161 aa6.4□□□□□ -1.39
CDC42SE1-204ENST00000483763 ERASQ7Z444 233 aa6.4□□□□□ -1.39
CDC42SE1-204ENST00000483763 GAGE12BA1L429 117 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 P0DMU3 169 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 UFSP1Q6NVU6 142 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 Q6ZSN1 163 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 DKK2Q9UBU2 259 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 M0R2P5 195 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 NUDT3O95989 172 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 C12orf54Q6X4T0 127 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 C3orf56Q8N813 242 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 LINC00467Q9BRT7 94 aa6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
CDC42SE1-204ENST00000483763 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
CDC42SE1-204ENST00000483763 CSNK1G2-AS1Q8NCQ2 148 aa6.38□□□□□ -1.39
CDC42SE1-204ENST00000483763 ST20Q9HBF5 79 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms