RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 INE1O15225 51 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 IL9P15248 144 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 ASIPP42127 132 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 SEC11AP67812 179 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 ZNF818PQ6ZRF7 136 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 MYOZ3Q8TDC0 251 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 AMELYQ99218 206 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 LAMC3Q9Y6N6 1575 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 PTPRFP10586 1907 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 CR1P17927 2039 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 MED13Q9UHV7 2174 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 TRAV23DV6A0A075B6W5 121 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 TRBV7-7A0A0K0K1E9 115 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 NAP1L6A6NFF2 107 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 K7EP34 96 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 M0R2N4 97 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 ATOX1O00244 68 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 ABCC3O15438 1527 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 ADGRB2O60241 1585 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 MDC1Q14676 2089 aaKnown RBP1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 CYP2G1PQ6ZSU1 146 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 ALPK2Q86TB3 2170 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 CYSTM1Q9H1C7 97 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 TNS1Q9HBL0 1735 aaKnown RBP1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 BET1LQ9NYM9 111 aa1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 MARF1Q9Y4F3 1742 aaKnown RBP1.53□□□□□ -2.16
SMARCA1-204ENST00000478420 SRCAPQ6ZRS2 3230 aa1.53□□□□□ -2.17
SMARCA1-204ENST00000478420 KMT2BQ9UMN6 2715 aaPredicted RBP1.53□□□□□ -2.17
SMARCA1-204ENST00000478420 ESPL1Q14674 2120 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 ZGRF1Q86YA3 2104 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 COL5A3P25940 1745 aaPredicted RBP1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 NBDYA0A0U1RRE5 68 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 CRYM-AS1A6NIL9 109 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 HIGD1CA8MV81 97 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 NMBP08949 121 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 KRTDAPP60985 99 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 LINC00322Q6ZN03 302 aaPredicted RBP1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 DEFB132Q7Z7B7 95 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 ZNF625Q96I27 306 aaPredicted RBP1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 C20orf78Q9BR46 151 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 TMEM14CQ9P0S9 112 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 TNRC6AQ8NDV7 1962 aaKnown RBP1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 SIP14410 1827 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 STRCP1A6NGW2 1772 aa1.52□□□□□ -2.17
SMARCA1-204ENST00000478420 KDM6BO15054 1643 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 PXDNQ92626 1479 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 PCDH15Q96QU1 1955 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 IGLV3-32A0A0A0MS00 114 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 HCRTO43612 131 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 MRPS14O60783 128 aaKnown RBP1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 SFT2D2O95562 160 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 GYPAP02724 150 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 TDRG1Q3Y452 100 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 C20orf197Q8N268 126 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 CHD1O14646 1710 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 ZNF142P52746 1687 aaPredicted RBP1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 SPAG17Q6Q759 2223 aa1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 MYO18AQ92614 2054 aaKnown RBP1.51□□□□□ -2.17
SMARCA1-204ENST00000478420 KDM5DQ9BY66 1539 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 CASP8AP2Q9UKL3 1982 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 DOCK1Q14185 1865 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 TRBV7-3A0A075B6L6 115 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 IGKV3D-7A0A0C4DH55 119 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 TRAPPC2P0DI81 140 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 TRAPPC2BP0DI82 140 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 CCL3L1P16619 93 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 FAUP35544 74 aaKnown RBP1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 UBE2D3P61077 147 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 UBE2D2P62837 147 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 Q5VV11 94 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 MANBALQ9NQG1 85 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 TET3O43151 1660 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 ARHGEF12Q9NZN5 1544 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 ABCA4P78363 2273 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 BAHCC1Q9P281 2608 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 UNC79Q9P2D8 2635 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 PATJQ8NI35 1801 aa1.5□□□□□ -2.17
SMARCA1-204ENST00000478420 NWD2Q9ULI1 1742 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 PTPRDP23468 1912 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 TRGV2A0A075B6R0 118 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 TRAV22A0A0B4J277 110 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 IGKV2-29A2NJV5 120 aaPredicted RBP1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 FXYD3Q14802 87 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 PEA15Q15121 130 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 ZNF56Q15929 161 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 FAM167A-AS1Q96KT0 104 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MGST2Q99735 147 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 BPESC1Q9GZL8 116 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms