RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PCNX2A6NKB5 2137 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 PI4KAP42356 2102 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 ABCA7Q8IZY2 2146 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 WDR87Q6ZQQ6 2873 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 PHF3Q92576 2039 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 GON4LQ3T8J9 2241 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 IGHV1OR21-1A0A087WYE8 117 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 TRAV8-3A0A0A6YYJ7 113 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1-8A0A0C4DH67 115 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 E7EQL1 145 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 E7EUB6 86 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 H7C2G1 150 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 M0R3E3 92 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 C10orf113Q5VZT2 155 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 VN1R4Q7Z5H5 301 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 Q8IYB0 196 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 NRACQ8N912 160 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 OPRPNQ99935 248 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 SPRR3Q9UBC9 169 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
ECHDC1-215ENST00000475319 ASCC3Q8N3C0 2202 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1D-43A0A0B4J1Z2 117 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 ERC2-IT1O76042 136 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 CD70P32970 193 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 LYZL1Q6UWQ5 148 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 USP24Q9UPU5 2620 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 IGLV5-37A0A075B6J1 123 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 A0A087WVE0 104 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV3D-7A0A0C4DH55 119 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 COX7A2LO14548 114 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 SH2D1AO60880 128 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 MIFP14174 115 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 KRTAP10-11P60412 298 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 MORN5Q5VZ52 161 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 ATP11AUNQ6ZP68 121 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 C7orf65Q6ZTY9 151 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 ZNF491Q8N8L2 437 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 IMMP1LQ96LU5 166 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 SCGB3A1Q96QR1 104 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 DCTN5Q9BTE1 182 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 ACACAQ13085 2346 aa4.36□□□□□ -1.71
ECHDC1-215ENST00000475319 BAHCC1Q9P281 2608 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1D-17A0A075B6S4 117 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 IGHV1-69DA0A0B4J2H0 117 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 LY6G6EA0A0G2JKS1 128 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 A8MUN3 132 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 F6UB75 175 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 IGLV3-19P01714 112 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 UBE2AP49459 152 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 ZNF80P51504 273 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 CXCL6P80162 114 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 TMEM30BQ3MIR4 351 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 SPINK9Q5DT21 86 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 FAM53AQ6NSI3 398 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 LRP4O75096 1905 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 IGF2RP11717 2491 aa4.35□□□□□ -1.71
ECHDC1-215ENST00000475319 FASNP49327 2511 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 ANKRD11Q6UB99 2663 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 C17orf98A8MV24 154 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 I3L3M4 83 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 LEPROTO15243 131 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 IGHV4-34P06331 123 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 CD28P10747 220 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 C2orf83Q53S99 150 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 CLEC2BQ92478 149 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 CCL17Q92583 94 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 PHLDA3Q9Y5J5 127 aa4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 URB1O60287 2271 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-215ENST00000475319 DMXL1Q9Y485 3027 aa4.34□□□□□ -1.72
ECHDC1-215ENST00000475319 CACNA1EQ15878 2313 aa4.34□□□□□ -1.72
ECHDC1-215ENST00000475319 KNTC1P50748 2209 aa4.34□□□□□ -1.72
ECHDC1-215ENST00000475319 GOLGA4Q13439 2230 aaKnown RBP4.34□□□□□ -1.72
ECHDC1-215ENST00000475319 VPS13AQ96RL7 3174 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 PRNTQ86SH4 94 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 LYPD1Q8N2G4 141 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 KLHL30-AS1Q8NEE0 82 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 AMELXQ99217 191 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 BPESC1Q9GZL8 116 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 CEP192Q8TEP8 1941 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 AGRNO00468 2067 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 MYOFQ9NZM1 2061 aa4.33□□□□□ -1.72
ECHDC1-215ENST00000475319 PKD1L2Q7Z442 2459 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 IGHV5-51A0A0C4DH38 117 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 M0R381 172 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 ZNF843Q8N446 348 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms