RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PMCHL1Q16048 86 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 IGFBP7Q16270 282 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 LYPD5Q6UWN5 251 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 C22orf24Q9Y442 160 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 TET3O43151 1660 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 MROH1Q8NDA8 1641 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 MAP3K4Q9Y6R4 1608 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 LAMB1P07942 1786 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 TRAV12-3A0A0B4J271 114 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 A0A1W2PNM2 257 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 IGFL1Q6UW32 110 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 TIMM21Q9BVV7 248 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 INO80Q9ULG1 1556 aaPredicted RBP2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 TANC1Q9C0D5 1861 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 ABCA10Q8WWZ4 1543 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 PATJQ8NI35 1801 aa2.51□□□□□ -2.01
PRPF40A-206ENST00000471167 PPRC1Q5VV67 1664 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 SDK2Q58EX2 2172 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 PRR14LQ5THK1 2151 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 IQGAP3Q86VI3 1631 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 PCNX2A6NKB5 2137 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 KIAA2026Q5HYC2 2103 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 MYO18AQ92614 2054 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 H7BZZ5 65 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 CTSGP08311 255 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 HRES1P13985 223 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 SNRPFP62306 86 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 GNGT1P63211 74 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 PDE6HQ13956 83 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 C10orf128Q5T292 105 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 CSAG1Q6PB30 78 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 Q6ZTI0 123 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 NDUFA11Q86Y39 141 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 C18orf32Q8TCD1 76 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 BLMP54132 1417 aaPredicted RBP2.5□□□□□ -2.01
PRPF40A-206ENST00000471167 UNC13BO14795 1591 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 ABCA8O94911 1581 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 SCN11AQ9UI33 1791 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 TRAV23DV6A0A075B6W5 121 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 TRBV10-1A0A0K0K1A3 114 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 TEX49A0A1B0GTD5 131 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 IGHV3-33P01772 117 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 FREM3P0C091 2139 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 SMIM11AP58511 58 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 UBE2D3P61077 147 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 CNBPP62633 177 aaKnown RBP2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 UBE2D2P62837 147 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 C1orf137Q5JT78 98 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 ZNF818PQ6ZRF7 136 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 Q8N6K4 173 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 FAM167A-AS1Q96KT0 104 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 ODF3Q96PU9 254 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 CLTCQ00610 1675 aaKnown RBP2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 PTPN23Q9H3S7 1636 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 CASP8AP2Q9UKL3 1982 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 CFAP74Q9C0B2 1584 aa2.49□□□□□ -2.01
PRPF40A-206ENST00000471167 NWD2Q9ULI1 1742 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 TRAV22A0A0B4J277 110 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 F2Z2F3 143 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 DEFB134Q4QY38 66 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 VMO1Q7Z5L0 202 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 CCL26Q9Y258 94 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 TMEM131LA2VDJ0 1609 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 KDM6BO15054 1643 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 LAMB2P55268 1798 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 KNDC1Q76NI1 1749 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 MYO5CQ9NQX4 1742 aa2.48□□□□□ -2.01
PRPF40A-206ENST00000471167 DOCK2Q92608 1830 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 MYO3AQ8NEV4 1616 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 LAMB4A4D0S4 1761 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 NINQ8N4C6 2090 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 HEATR5BQ9P2D3 2071 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 CHKB-CPT1BH3BT56 60 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 BCE1O60756 84 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 ACYP1P07311 99 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 UBE2D1P51668 147 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 EFNA4P52798 201 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 EDDM3BP56851 147 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 ELOBQ15370 118 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 SFTA2Q6UW10 78 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 C4orf3Q8WVX3 66 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 BPESC1Q9GZL8 116 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 MRPL36Q9P0J6 103 aaKnown RBP2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 PLXNA1Q9UIW2 1896 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 SLIT2O94813 1529 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 ABCC1P33527 1531 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 DUOX2Q9NRD8 1548 aa2.47□□□□□ -2.01
PRPF40A-206ENST00000471167 COX6CP09669 75 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 Q5VV11 94 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms