RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SEC11AP67812 179 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 GAGE1Q13065 139 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 NSUN5P1Q3KNT7 163 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 C11orf44Q8N8P7 122 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 KLHL30-AS1Q8NEE0 82 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 OR11H1Q8NG94 326 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 KIR2DL4Q99706 377 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 CITED2Q99967 270 aaPredicted RBP4.18□□□□□ -1.74
HDAC8-216ENST00000470998 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 WNK1Q9H4A3 2382 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 IGKV3-7A0A075B6H7 116 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 TRBV27A0A0K0K1C4 114 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 A8MWV9 139 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 F6UB75 175 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 SMKR1H3BMG3 65 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 H3BMM0 161 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 VCYO14598 125 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 NUDT3O95989 172 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 INSP01308 110 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 IGKCP01834 107 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 PRSS1P07477 247 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 ZNF415Q09FC8 603 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 ODF1Q14990 250 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 RHOHQ15669 191 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 KHDC1LQ5JSQ8 128 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 MUC21Q5SSG8 566 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 TRPT1Q86TN4 253 aaKnown RBP4.17□□□□□ -1.74
HDAC8-216ENST00000470998 LINC00469Q8N7U9 141 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 MRAPQ8TCY5 172 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 TIMM17AQ99595 171 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 SPXQ9BT56 116 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 MCRIP2Q9BUT9 160 aaKnown RBP4.17□□□□□ -1.74
HDAC8-216ENST00000470998 HIGD1BQ9P298 99 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 CYSLTR1Q9Y271 337 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 KIF25-AS1Q9Y6Z4 181 aa4.17□□□□□ -1.74
HDAC8-216ENST00000470998 A0A087WX48 190 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 TRAV12-3A0A0B4J271 114 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 MUC21A0A0G2JKD1 596 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 MUC21A0A140T8X8 626 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 F8VRH5 84 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 J3KRW8 73 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 CIDEAO60543 219 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 MGPP08493 103 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 CRYBA4P53673 196 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 HSD52Q0P140 79 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 DEFB114Q30KQ6 69 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 TMEM97Q5BJF2 176 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 C10orf99Q6UWK7 81 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 ERASQ7Z444 233 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 TMEM61Q8N0U2 210 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 C14orf178Q8N769 122 aaPredicted RBP4.16□□□□□ -1.74
HDAC8-216ENST00000470998 ORAOV1Q8WV07 137 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 RASL10AQ92737 203 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 MAP6D1Q9H9H5 199 aa4.16□□□□□ -1.74
HDAC8-216ENST00000470998 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.74
HDAC8-216ENST00000470998 A0A1B0GV90 55 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 A6NDN8 102 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 CBY3A6NI87 242 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 M0R2P5 195 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 CCL24O00175 119 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 TFPI2P48307 235 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 POLR2KP53803 58 aaKnown RBP4.15□□□□□ -1.75
HDAC8-216ENST00000470998 LINC00315P59091 139 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 DEFB131AP59861 70 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 HERVK_113P61574 105 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 EGFEM1PQ0D2K5 195 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 SPINK13Q1W4C9 94 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 SUMO4Q6EEV6 95 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 ADAMTSL5Q6ZMM2 481 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 DLX4Q92988 240 aaPredicted RBP4.15□□□□□ -1.75
HDAC8-216ENST00000470998 SCGB3A1Q96QR1 104 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 C1QTNF4Q9BXJ3 329 aa4.15□□□□□ -1.75
HDAC8-216ENST00000470998 TIMM8BQ9Y5J9 83 aaPredicted RBP4.15□□□□□ -1.75
HDAC8-216ENST00000470998 PRKDCP78527 4128 aaKnown RBP4.14□□□□□ -1.75
HDAC8-216ENST00000470998 TRAV26-2A0A0B4J265 109 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 OR11H12B2RN74 326 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 H0Y8G0 127 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 GNRH2O43555 120 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 FGF6P10767 208 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 GCSHP23434 173 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 PTTG1IPP53801 180 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 SMAGPQ0VAQ4 97 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 ZNF56Q15929 161 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 TAL2Q16559 108 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 MAJINQ3KP22 176 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 ZNF876PQ49A33 203 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 MORN3Q6PF18 240 aaPredicted RBP4.14□□□□□ -1.75
HDAC8-216ENST00000470998 C2orf66Q6UXQ4 117 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 ZFP2Q6ZN57 461 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 STHQ8IWL8 128 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 DNAJC30Q96LL9 226 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
HDAC8-216ENST00000470998 SDHAF1A6NFY7 115 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms