RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TEX29Q8N6K0 151 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 CHCHD1Q96BP2 118 aaKnown RBP1.35□□□□□ -2.19
SMC4-203ENST00000462668 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 PKD1L1Q8TDX9 2849 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 PTPN13Q12923 2485 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 C2orf70A6NJV1 201 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 NPFFO15130 113 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 EIF2B2P49770 351 aaKnown RBP1.35□□□□□ -2.19
SMC4-203ENST00000462668 ARPINQ7Z6K5 226 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 OR5H6Q8NGV6 325 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 IGHV3-33P01772 117 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 TMEM191AQ9H0A3 160 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 SDHAF1A6NFY7 115 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 OR2T8A6NH00 312 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 TPST1O60507 370 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 UBL3O95164 117 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 AZU1P20160 251 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 C1orf137Q5JT78 98 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 BRK1Q8WUW1 75 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 LPAR5Q9H1C0 372 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 RPL26L1Q9UNX3 145 aaKnown RBP1.34□□□□□ -2.19
SMC4-203ENST00000462668 LY96Q9Y6Y9 160 aa1.34□□□□□ -2.19
SMC4-203ENST00000462668 HECTD1Q9ULT8 2610 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 CENPEQ02224 2701 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 FAM236AA0A1B0GUQ0 79 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 FAM236BA0A1B0GV22 79 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 CCDC160A6NGH7 325 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 DPH3Q96FX2 82 aa1.34□□□□□ -2.2
SMC4-203ENST00000462668 F8W036 122 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 SLC25A4P12235 298 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 TSC22D3Q99576 134 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 GINS4Q9BRT9 223 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 TNFSF18Q9UNG2 199 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 SETD2Q9BYW2 2564 aaPredicted RBP1.33□□□□□ -2.2
SMC4-203ENST00000462668 TRBV20-1A0A075B6N2 111 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 ZNF705BP0CI00 300 aaPredicted RBP1.33□□□□□ -2.2
SMC4-203ENST00000462668 PCOTHQ58A44 107 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 APOBP04114 4563 aaKnown RBP1.33□□□□□ -2.2
SMC4-203ENST00000462668 APOC1P02654 83 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 HSD17B12Q53GQ0 312 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 CTAGE3PQ8IX95 158 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 NBEAL1Q6ZS30 2694 aa1.33□□□□□ -2.2
SMC4-203ENST00000462668 NSD1Q96L73 2696 aaPredicted RBP1.33□□□□□ -2.2
SMC4-203ENST00000462668 TRAV1-1A0A0B4J248 108 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 APODP05090 189 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 ERHP84090 104 aaKnown RBP1.32□□□□□ -2.2
SMC4-203ENST00000462668 GLIPR1L1Q6UWM5 242 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 C4orf22Q6V702 233 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 LINC00301Q8NCQ3 95 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 PRRC2BQ5JSZ5 2229 aaKnown RBP1.32□□□□□ -2.2
SMC4-203ENST00000462668 MYCBP2O75592 4640 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 IGKV2-24A0A0C4DH68 120 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 SNRPD3P62318 126 aaKnown RBP1.32□□□□□ -2.2
SMC4-203ENST00000462668 BLCAPP62952 87 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 C10orf55Q5SWW7 151 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 Q8TAT8 98 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 ROCK2O75116 1388 aaKnown RBP1.32□□□□□ -2.2
SMC4-203ENST00000462668 CMPK1P30085 196 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 RNASE11Q8TAA1 199 aaKnown RBP1.32□□□□□ -2.2
SMC4-203ENST00000462668 COMMD3Q9UBI1 195 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 ACACBO00763 2458 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 TRAV3A0A0B4J244 114 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 LYRM1O43325 122 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 IZUMO2Q6UXV1 221 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 ARL11Q969Q4 196 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 Q96M85 177 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 TP53RKQ96S44 253 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 ZFYVE26Q68DK2 2539 aa1.32□□□□□ -2.2
SMC4-203ENST00000462668 MAP1AP78559 2803 aaPredicted RBP1.31□□□□□ -2.2
SMC4-203ENST00000462668 LRP1BQ9NZR2 4599 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 LSM2Q9Y333 95 aaKnown RBP1.31□□□□□ -2.2
SMC4-203ENST00000462668 NCOR2Q9Y618 2525 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 FAT1Q14517 4588 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 TRAV2A0A0B4J234 112 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 LOC100130705A0A1B0GUX0 176 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 CACNA1DQ01668 2161 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 FOXI2Q6ZQN5 318 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 PATE1Q8WXA2 126 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 SMIM3Q9BZL3 60 aa1.31□□□□□ -2.2
SMC4-203ENST00000462668 SEC16AO15027 2179 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 H3BRN7 92 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 M0R2N4 97 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 S100A1P23297 94 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 ELOBQ15370 118 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 M0R2Z0 102 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 TRACP01848 142 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 FGF7P21781 194 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 CROCCP2Q86T23 111 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 MMGT1Q8N4V1 131 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 BANF2Q9H503 90 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 COA4Q9NYJ1 87 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 MRPS14O60783 128 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms