RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TRPM2O94759 1503 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 EHBP1L1Q8N3D4 1523 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 F6UZH7 168 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 IL5P05113 134 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 WHAMMP3Q1A5X7 153 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 PDE4DIPQ5VU43 2346 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 PLPP5Q8NEB5 264 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 ODF3Q96PU9 254 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 MRPL57Q9BQC6 102 aaKnown RBP1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 INO80Q9ULG1 1556 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 MARF1Q9Y4F3 1742 aaKnown RBP1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 CASZ1Q86V15 1759 aa1.87□□□□□ -2.11
HMGB1P26-201ENST00000452520 COL4A1P02462 1669 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 RREB1Q92766 1687 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 SPHKAPQ2M3C7 1700 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 ABCC5O15440 1437 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 MYOM3Q5VTT5 1437 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 SMG6Q86US8 1419 aaKnown RBP1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 MIF4GDA9UHW6 222 aaKnown RBP1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 S100A1P23297 94 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 S100PP25815 95 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 BTG2P78543 158 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 SBSPONQ8IVN8 264 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 COPS9Q8WXC6 57 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 PP6455Q8WZ26 134 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 RERGLQ9H628 205 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 C22orf24Q9Y442 160 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 USP32Q8NFA0 1604 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 PLCH1Q4KWH8 1693 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 LMTK2Q8IWU2 1503 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 DUOX2Q9NRD8 1548 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 COL6A3P12111 3177 aa1.86□□□□□ -2.11
HMGB1P26-201ENST00000452520 PTPRDP23468 1912 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 FOCADQ5VW36 1801 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 CORTO00230 105 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 SPANXN1Q5VSR9 72 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 DEFB123Q8N688 67 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 SPTSSAQ969W0 71 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 NCOA6Q14686 2063 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 TECTAO75443 2155 aa1.85□□□□□ -2.11
HMGB1P26-201ENST00000452520 HFM1A2PYH4 1435 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 EEA1Q15075 1411 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 CASKIN1Q8WXD9 1431 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 RRBP1Q9P2E9 1410 aaKnown RBP1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 NALCNQ8IZF0 1738 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 TRBV10-1A0A0K0K1A3 114 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 SNCGO76070 127 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 NDUFB6O95139 128 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 CCKP06307 115 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 TMEM141Q96I45 108 aa1.84□□□□□ -2.11
HMGB1P26-201ENST00000452520 MKI67P46013 3256 aaKnown RBP1.84□□□□□ -2.12
HMGB1P26-201ENST00000452520 SNRNP200O75643 2136 aaKnown RBP1.84□□□□□ -2.12
HMGB1P26-201ENST00000452520 PHRF1Q9P1Y6 1649 aaKnown RBP1.84□□□□□ -2.12
HMGB1P26-201ENST00000452520 MYH7P12883 1935 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 GCC2Q8IWJ2 1684 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 NWD2Q9ULI1 1742 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 RGPD8O14715 1765 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 COL14A1Q05707 1796 aaKnown RBP1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 TULP4Q9NRJ4 1543 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 HIGD1CA8MV81 97 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 LYNX1P0DP58 116 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 PIPP12273 146 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 RPL37AP61513 92 aaKnown RBP1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 LSM10Q969L4 123 aaKnown RBP1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 NAA60Q9H7X0 242 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 CACNA1BQ00975 2339 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 LRRIQ1Q96JM4 1722 aa1.83□□□□□ -2.12
HMGB1P26-201ENST00000452520 ATP7BP35670 1465 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 LOC101927531A0A1B0GV80 90 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 SNAPC5O75971 98 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 PRB1P04280 392 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 UBE2G1P62253 170 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 MRPL35Q9NZE8 188 aaKnown RBP1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 SERP1Q9Y6X1 66 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 TOPAZ1Q8N9V7 1692 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 NRAPQ86VF7 1730 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 SBF2Q86WG5 1849 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 NRXN1Q9ULB1 1477 aa1.82□□□□□ -2.12
HMGB1P26-201ENST00000452520 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 ZGRF1Q86YA3 2104 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 MCRIP1C9JLW8 97 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 MRPS10P82664 201 aaKnown RBP1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 Q56UQ5 140 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 TSKUQ8WUA8 353 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
HMGB1P26-201ENST00000452520 XRN1Q8IZH2 1706 aaKnown RBP1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 PARP4Q9UKK3 1724 aaKnown RBP1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 ATP6V1G2-DDX39BF2Z307 99 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 S100A7L2Q5SY68 101 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 SLC48A1Q6P1K1 146 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 CEP162Q5TB80 1403 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 PPIP5K1Q6PFW1 1433 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 ANKRD50Q9ULJ7 1429 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 SZT2Q5T011 3432 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 NEXMIFQ5QGS0 1516 aa1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 CICQ96RK0 1608 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P26-201ENST00000452520 FMN2Q9NZ56 1722 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms