RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 EVI2AP22794 236 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-203ENST00000449049 SAMD10Q9BYL1 202 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
SHMT2-203ENST00000449049 DAD1P61803 113 aa9.97□□□□□ -0.81
SHMT2-203ENST00000449049 COX19Q49B96 90 aa9.97□□□□□ -0.81
SHMT2-203ENST00000449049 OR4C5Q8NGB2 326 aa9.97□□□□□ -0.81
SHMT2-203ENST00000449049 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
SHMT2-203ENST00000449049 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.81
SHMT2-203ENST00000449049 A0A087WWL8 130 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 LINC00315P59091 139 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 C12orf74Q32Q52 190 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 COL5A1-AS1Q5SY13 56 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 U3KQK5 164 aa9.96□□□□□ -0.82
SHMT2-203ENST00000449049 RHODO00212 210 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 LINC00310P59036 64 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 C11orf45Q8TAV5 145 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
SHMT2-203ENST00000449049 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 IGHV3-53P01767 116 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 HLA-DQA1P01909 254 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 MT-ND6P03923 174 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
SHMT2-203ENST00000449049 NACAE9PAV3 2078 aa9.93□□□□□ -0.82
SHMT2-203ENST00000449049 PRKDCP78527 4128 aaKnown RBP9.93□□□□□ -0.82
SHMT2-203ENST00000449049 CCL25O15444 150 aa9.93□□□□□ -0.82
SHMT2-203ENST00000449049 SERF1AO75920 110 aa9.93□□□□□ -0.82
SHMT2-203ENST00000449049 Q0VG73 95 aa9.93□□□□□ -0.82
SHMT2-203ENST00000449049 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-203ENST00000449049 PAM16Q9Y3D7 125 aa9.93□□□□□ -0.82
SHMT2-203ENST00000449049 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 ATP5G1P05496 136 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 MGPP08493 103 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
SHMT2-203ENST00000449049 SLAQ13239 276 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 FHL2Q14192 279 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 ZNF56Q15929 161 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 Q6ZTC4 211 aa9.92□□□□□ -0.82
SHMT2-203ENST00000449049 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
SHMT2-203ENST00000449049 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
SHMT2-203ENST00000449049 BATFQ16520 125 aa9.91□□□□□ -0.82
SHMT2-203ENST00000449049 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
SHMT2-203ENST00000449049 GATA1P15976 413 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-203ENST00000449049 VPS25Q9BRG1 176 aa9.91□□□□□ -0.82
SHMT2-203ENST00000449049 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 F5H697 171 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 APCSP02743 223 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 SUMO4Q6EEV6 95 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 Q6ZSN1 163 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 BAGE3Q86Y29 109 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 MRAP2Q96G30 205 aa9.9□□□□□ -0.82
SHMT2-203ENST00000449049 UBE2V1Q13404 147 aa9.89□□□□□ -0.83
SHMT2-203ENST00000449049 Q8N976 141 aa9.89□□□□□ -0.83
SHMT2-203ENST00000449049 TRAV26-2A0A0B4J265 109 aa9.89□□□□□ -0.83
SHMT2-203ENST00000449049 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
SHMT2-203ENST00000449049 TRBV6-4A0A1B0GX49 114 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 M0QY20 66 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 HTN3P15516 51 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 UQCR10Q9UDW1 63 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
SHMT2-203ENST00000449049 F5H768 121 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 H7C1H1 209 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 K7EQD1 137 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 CRYBA4P53673 196 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 FBN3Q75N90 2809 aa9.87□□□□□ -0.83
SHMT2-203ENST00000449049 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 D6R8Y8 96 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 SMKR1H3BMG3 65 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 NCR2O95944 276 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 CKS2P33552 79 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 KIAA1644Q3SXP7 199 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 STPG4Q8N801 248 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 KRTDAPP60985 99 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 RHOHQ15669 191 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 OR10J3Q5JRS4 329 aa9.86□□□□□ -0.83
SHMT2-203ENST00000449049 TRBV10-1A0A0K0K1A3 114 aa9.85□□□□□ -0.83
SHMT2-203ENST00000449049 P0DMU3 169 aa9.85□□□□□ -0.83
SHMT2-203ENST00000449049 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
SHMT2-203ENST00000449049 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
SHMT2-203ENST00000449049 NRACQ8N912 160 aa9.85□□□□□ -0.83
SHMT2-203ENST00000449049 LAMTOR2Q9Y2Q5 125 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms