RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 MOB4Q9Y3A3 225 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
MCF2L-218ENST00000442625 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-218ENST00000442625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.57□□□□□ -0.72
MCF2L-218ENST00000442625 SPG11Q96JI7 2443 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 SOCS3O14543 225 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 LINC00315P59091 139 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 LY6DQ14210 128 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 PRO0628Q9UI54 55 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 IGIPA6NJ69 53 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 EIF4EBP3O60516 100 aaPredicted RBP10.56□□□□□ -0.72
MCF2L-218ENST00000442625 IGKV3-20P01619 116 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 ANKRD29Q8N6D5 301 aa10.56□□□□□ -0.72
MCF2L-218ENST00000442625 FAM223BA6NKX1 122 aa10.55□□□□□ -0.72
MCF2L-218ENST00000442625 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
MCF2L-218ENST00000442625 FAM223AQ8IWN6 122 aa10.55□□□□□ -0.72
MCF2L-218ENST00000442625 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
MCF2L-218ENST00000442625 OVOL1O14753 267 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 MALP21145 153 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 LINC01587Q99440 93 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 C19orf84I3L1E1 186 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 ELANEP08246 267 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
MCF2L-218ENST00000442625 PMVKQ15126 192 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 KIF25-AS1Q9Y6Z4 181 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
MCF2L-218ENST00000442625 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 BLCAPP62952 87 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 PPDPFLQ8WWR9 84 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 SDHAF1A6NFY7 115 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 NDUFA4O00483 81 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 RPS28P62857 69 aaKnown RBP10.53□□□□□ -0.72
MCF2L-218ENST00000442625 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
MCF2L-218ENST00000442625 CREBBPQ92793 2442 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 TRAV12-2A0A075B6T6 113 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 AMELXQ99217 191 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.72
MCF2L-218ENST00000442625 MDFICQ9P1T7 246 aa10.52□□□□□ -0.72
MCF2L-218ENST00000442625 CSPG4Q6UVK1 2322 aa10.52□□□□□ -0.73
MCF2L-218ENST00000442625 A8MWV9 139 aa10.52□□□□□ -0.73
MCF2L-218ENST00000442625 HERVK_113P61574 105 aa10.52□□□□□ -0.73
MCF2L-218ENST00000442625 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
MCF2L-218ENST00000442625 C10orf126Q8N4M7 172 aa10.52□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV1-69DA0A0B4J2H0 117 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 J3QQQ9 107 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV1-69P01742 117 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 POLR2KP53803 58 aaKnown RBP10.51□□□□□ -0.73
MCF2L-218ENST00000442625 SLC25A29Q8N8R3 303 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 H3BUX3 64 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
MCF2L-218ENST00000442625 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
MCF2L-218ENST00000442625 SPTBN4Q9H254 2564 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 C4orf26Q17RF5 130 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 SLC25A20O43772 301 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
MCF2L-218ENST00000442625 VCYO14598 125 aa10.48□□□□□ -0.73
MCF2L-218ENST00000442625 ZNF56Q15929 161 aa10.48□□□□□ -0.73
MCF2L-218ENST00000442625 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
MCF2L-218ENST00000442625 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
MCF2L-218ENST00000442625 Q6Q795 121 aa10.48□□□□□ -0.73
MCF2L-218ENST00000442625 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 NPC2P61916 151 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 Q1RN00 199 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 Q6ZSV7 163 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 CRLF1O75462 422 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 SNCGO76070 127 aa10.47□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV4OR15-8A0A075B7B6 117 aa10.46□□□□□ -0.73
MCF2L-218ENST00000442625 A0A087WW49 117 aa10.46□□□□□ -0.73
MCF2L-218ENST00000442625 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
MCF2L-218ENST00000442625 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-218ENST00000442625 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
MCF2L-218ENST00000442625 IGHV3-73A0A0B4J1V6 119 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 TMEM262E9PQX1 116 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 IGHV3-33P01772 117 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 IGHG2P01859 326 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 P0DMU3 169 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 FAM231AP0DMU4 169 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms