RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 SETBP1Q9Y6X0 1596 aa3.54□□□□□ -1.84
XIST-201ENST00000416330 SCN4AP35499 1836 aa3.54□□□□□ -1.84
XIST-201ENST00000416330 MAP3K4Q9Y6R4 1608 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 IGHV3-33P01772 117 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 MDKP21741 143 aaPredicted RBP3.53□□□□□ -1.84
XIST-201ENST00000416330 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
XIST-201ENST00000416330 PDE6HQ13956 83 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 ZNF818PQ6ZRF7 136 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 NDUFA11Q86Y39 141 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 LYPD1Q8N2G4 141 aa3.53□□□□□ -1.84
XIST-201ENST00000416330 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 UBE2D1P51668 147 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 EDDM3BP56851 147 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 ZNF56Q15929 161 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 C1orf137Q5JT78 98 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 TMEM170BQ5T4T1 132 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 ABCC1P33527 1531 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 ABCC2Q92887 1545 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 CDC42BPBQ9Y5S2 1711 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 NRXN1Q9ULB1 1477 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 PCNX2A6NKB5 2137 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 PTPN23Q9H3S7 1636 aa3.52□□□□□ -1.85
XIST-201ENST00000416330 TUBGCP6Q96RT7 1819 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 KNDC1Q76NI1 1749 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 MYO5CQ9NQX4 1742 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 TRAV23DV6A0A075B6W5 121 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 TRBV10-1A0A0K0K1A3 114 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 ELOBQ15370 118 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 Q6ZTI0 123 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 KIF21AQ7Z4S6 1674 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 COL27A1Q8IZC6 1860 aaPredicted RBP3.51□□□□□ -1.85
XIST-201ENST00000416330 MYO16Q9Y6X6 1858 aa3.51□□□□□ -1.85
XIST-201ENST00000416330 PTPRDP23468 1912 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 MYH4Q9Y623 1939 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 CTSGP08311 255 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 HRES1P13985 223 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 LIMD2Q9BT23 127 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 MRPL36Q9P0J6 103 aaKnown RBP3.5□□□□□ -1.85
XIST-201ENST00000416330 LAMB1P07942 1786 aa3.5□□□□□ -1.85
XIST-201ENST00000416330 EFCAB5A4FU69 1503 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 CUX1P39880 1505 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 KIAA1549LQ6ZVL6 1849 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 SCN11AQ9UI33 1791 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 SFTA3P0C7M3 94 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 LY6EQ16553 131 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 PYDC2Q56P42 97 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 CCL26Q9Y258 94 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 SDK2Q58EX2 2172 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 KCPQ6ZWJ8 1503 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 PATJQ8NI35 1801 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 FREM3P0C091 2139 aa3.49□□□□□ -1.85
XIST-201ENST00000416330 TRBV25-1A0A075B6N4 114 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 A0A1W2PNU3 283 aaPredicted RBP3.48□□□□□ -1.85
XIST-201ENST00000416330 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 RTL8CO15255 209 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 COX6CP09669 75 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 KIAA2026Q5HYC2 2103 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 DOCK2Q92608 1830 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 ADAMTS7Q9UKP4 1686 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 TCHHQ07283 1943 aa3.48□□□□□ -1.85
XIST-201ENST00000416330 CLTCQ00610 1675 aaKnown RBP3.47□□□□□ -1.85
XIST-201ENST00000416330 COL4A6Q14031 1691 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 TRAV40A0A0B4J280 105 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 TMEM14DPA8MWL7 114 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 NEXMIFQ5QGS0 1516 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 MYO3AQ8NEV4 1616 aa3.47□□□□□ -1.85
XIST-201ENST00000416330 MED13Q9UHV7 2174 aa3.46□□□□□ -1.85
XIST-201ENST00000416330 PREX2Q70Z35 1606 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 CLPSL1A2RUU4 121 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 C10orf142B7Z368 130 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 F8WEM9 126 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 DEFB134Q4QY38 66 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 IQSEC2Q5JU85 1478 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 LAMB4A4D0S4 1761 aa3.46□□□□□ -1.86
XIST-201ENST00000416330 TANC1Q9C0D5 1861 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 HEATR5BQ9P2D3 2071 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 IQCF6A8MYZ5 107 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 IGKV3-15P01624 115 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 HMGN2P05204 90 aaKnown RBP3.45□□□□□ -1.86
XIST-201ENST00000416330 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 DYNLRB1Q9NP97 96 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
XIST-201ENST00000416330 KDM6BO15054 1643 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 NWD2Q9ULI1 1742 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 LTBP2Q14767 1821 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 FAM223BA6NKX1 122 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 PATE1Q8WXA2 126 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 NDUFA4L2Q9NRX3 87 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 TMEM14BQ9NUH8 114 aa3.44□□□□□ -1.86
XIST-201ENST00000416330 PRR34Q9NV39 138 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms