RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TGIF2-C20orf24A0A0A6YYL0 155 aa5.24□□□□□ -1.57
USP16-204ENST00000399976 TRGC2P03986 189 aa5.24□□□□□ -1.57
USP16-204ENST00000399976 HTN1P15515 57 aa5.24□□□□□ -1.57
USP16-204ENST00000399976 EMP1P54849 157 aa5.24□□□□□ -1.57
USP16-204ENST00000399976 RPL19P84098 196 aaKnown RBP5.24□□□□□ -1.57
USP16-204ENST00000399976 GTSF1Q8WW33 167 aa5.24□□□□□ -1.57
USP16-204ENST00000399976 PACRGQ96M98 296 aaPredicted RBP5.24□□□□□ -1.57
USP16-204ENST00000399976 RNASE7Q9H1E1 156 aaKnown RBP5.24□□□□□ -1.57
USP16-204ENST00000399976 TRGV4A0A0C4DH28 118 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 A0A1B0GUT8 65 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 F5H768 121 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 PAX4O43316 350 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 PRM2P04554 102 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 RIGQ13278 110 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 SPANXN1Q5VSR9 72 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 LYZL1Q6UWQ5 148 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 OR10AG1Q8NH19 301 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 ZNF479Q96JC4 524 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 PGLYRP4Q96LB8 373 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 A0A096LPF7 62 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 A0A1B0GXF2 115 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 GZMBP10144 247 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 SMIM15Q7Z3B0 74 aa5.23□□□□□ -1.57
USP16-204ENST00000399976 NCR2O95944 276 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 ADIRFQ15847 76 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 GTSF1LQ9H1H1 148 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 TMEM238LA0A1B0GVL6 79 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 GRIFINA4D1Z8 144 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 TCAPO15273 167 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 NEGR1Q7Z3B1 354 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 LAMTOR2Q9Y2Q5 125 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 IGLL5B9A064 214 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 SMIM17P0DL12 118 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 PRB4P10163 310 aaPredicted RBP5.22□□□□□ -1.57
USP16-204ENST00000399976 CCL18P55774 89 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 CDPF1Q6NVV7 123 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 DAZ4Q86SG3 579 aaKnown RBP5.22□□□□□ -1.57
USP16-204ENST00000399976 SLC25A29Q8N8R3 303 aa5.22□□□□□ -1.57
USP16-204ENST00000399976 DAZ3Q9NR90 486 aaKnown RBP5.22□□□□□ -1.57
USP16-204ENST00000399976 HIGD1CA8MV81 97 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 RAB4AP20338 218 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 SRIP30626 198 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 PCP4P48539 62 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 UBE2D3P61077 147 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 UBE2D2P62837 147 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 TTC32Q5I0X7 151 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 PPBPP02775 128 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 ESDP10768 282 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 NTF3P20783 257 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 GAGE1Q13065 139 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 NUP35Q8NFH5 326 aa5.21□□□□□ -1.58
USP16-204ENST00000399976 H7C423 109 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 FABP4P15090 132 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 RPL36AP83881 106 aaKnown RBP5.2□□□□□ -1.58
USP16-204ENST00000399976 LELP1Q5T871 98 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 ZFAND6Q6FIF0 208 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
USP16-204ENST00000399976 TRBV7-3A0A075B6L6 115 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 M0QY20 66 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 KCNIP4Q6PIL6 250 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 ZNF664Q8N3J9 261 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 TGP01266 2768 aa5.2□□□□□ -1.58
USP16-204ENST00000399976 TMSB15BA0A087X1C1 80 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 A0A1B0GV90 55 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 K7EMI3 77 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 DNAH10OSP0CZ25 163 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 HBBP68871 147 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 Q6ZR54 194 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 ZNRF2Q8NHG8 242 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 GYPEP15421 78 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 LAGE3Q14657 143 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 IQCJQ1A5X6 159 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 LYPD5Q6UWN5 251 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 TMEM18Q96B42 140 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 C10orf126Q8N4M7 172 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 ATP6V0E2Q8NHE4 81 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 C20orf78Q9BR46 151 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 SAMD10Q9BYL1 202 aa5.19□□□□□ -1.58
USP16-204ENST00000399976 LYSTQ99698 3801 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 STARD9Q9P2P6 4700 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 NBEAL2Q6ZNJ1 2754 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 MT-ND6P03923 174 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 TWIST1Q15672 202 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 LINC01556Q5JQF7 62 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 FAM104BQ5XKR9 115 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 RNF185Q96GF1 192 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 LINC00588Q9Y4M8 146 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 URGCP-MRPS24S4R325 110 aa5.18□□□□□ -1.58
USP16-204ENST00000399976 NPSP0C0P6 89 aa5.17□□□□□ -1.58
USP16-204ENST00000399976 VPS13DQ5THJ4 4388 aa5.17□□□□□ -1.58
USP16-204ENST00000399976 TRAV8-6A0A0B4J262 113 aa5.17□□□□□ -1.58
USP16-204ENST00000399976 SMAGPQ0VAQ4 97 aa5.17□□□□□ -1.58
USP16-204ENST00000399976 ZNF56Q15929 161 aa5.17□□□□□ -1.58
USP16-204ENST00000399976 ESRGQ1W209 222 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms