RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 NXPH4O95158 308 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 PFN2P35080 140 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 USMG5Q96IX5 58 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 TRAV4A0A0B4J268 109 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 HOXD3P31249 432 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-205ENST00000397611 DOPEY2Q9Y3R5 2298 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 RPL39P62891 51 aaKnown RBP4.17□□□□□ -1.74
PTPRD-205ENST00000397611 TOMM6Q96B49 74 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 JPT2Q9H910 190 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 IGHV3-16A0A0C4DH30 117 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 FAM223BA6NKX1 122 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 CRLF1O75462 422 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 HERVK_113P63121 156 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 FAM223AQ8IWN6 122 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 SIRPDQ9H106 197 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 LAMA3Q16787 3333 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 TRAV12-2A0A075B6T6 113 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 C11orf86A6NJI1 115 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 IGF1P05019 195 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 C11orf71Q6IPW1 123 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 ODF3Q96PU9 254 aa4.17□□□□□ -1.74
PTPRD-205ENST00000397611 ATP6V0E1O15342 81 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 Q8N9W7 124 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 F6UB75 175 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 TRGV1A0A0A0MS02 117 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 K7EMT4 169 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 POM121L12Q8N7R1 296 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 PRAC2D3DTV9 90 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 LGALS9O00182 355 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 SUMO4Q6EEV6 95 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 G3V318 75 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 NDUFA4O00483 81 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 PIP4P2Q8N4L2 257 aa4.16□□□□□ -1.74
PTPRD-205ENST00000397611 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 Q9H8V8 135 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 MTORP42345 2549 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 RNF185Q96GF1 192 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 PF4P02776 101 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 BRK1Q8WUW1 75 aa4.15□□□□□ -1.74
PTPRD-205ENST00000397611 TMEM258P61165 79 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.75
PTPRD-205ENST00000397611 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
PTPRD-205ENST00000397611 ABCA12Q86UK0 2595 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-205ENST00000397611 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-205ENST00000397611 SPINK13Q1W4C9 94 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 H3BT86 120 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 LY6HO94772 140 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 C5orf42Q9H799 3197 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 RNF152Q8N8N0 203 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 LINC01600Q96MT4 127 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 OPRPNQ99935 248 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-205ENST00000397611 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
PTPRD-205ENST00000397611 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 C10orf105Q8TEF2 133 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 TRAV13-2A0A0B4J235 113 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 A0A1W2PRX2 142 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 UQCRQO14949 82 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 NDUFA7O95182 113 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 ZNF80P51504 273 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-205ENST00000397611 STHQ8IWL8 128 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 CFAP46Q8IYW2 2715 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV1OR15-1A0A075B7D0 117 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 hADV29S1A0JD25 119 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 UBE2D1P51668 147 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 BRD3OSQ6XYD6 125 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 Q71RC1 249 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-205ENST00000397611 YLPM1P49750 1951 aaKnown RBP4.14□□□□□ -1.75
PTPRD-205ENST00000397611 BRCA2P51587 3418 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 NDUFC2O95298 119 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 GHRHP01286 108 aa4.14□□□□□ -1.75
PTPRD-205ENST00000397611 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 NFE4Q86UQ8 179 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 ZFAND2AQ8N6M9 145 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 NRACQ8N912 160 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 FAM110AQ9BQ89 295 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 Q9HAA7 133 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 MKI67P46013 3256 aaKnown RBP4.13□□□□□ -1.75
PTPRD-205ENST00000397611 LMO4P61968 165 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 DAZ1Q9NQZ3 744 aaKnown RBP4.13□□□□□ -1.75
PTPRD-205ENST00000397611 PRB2P02812 416 aaPredicted RBP4.13□□□□□ -1.75
PTPRD-205ENST00000397611 JMJD1CQ15652 2540 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 A0A0U1RQV1 116 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 RHODO00212 210 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 ORMDL1Q9P0S3 153 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 IGHG2P01859 326 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 GATA3P23771 443 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 ZNF462Q96JM2 2506 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 PSMB8P28062 276 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms