RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NUTF2P61970 127 aaKnown RBP10.92□□□□□ -0.66
SCAF11-204ENST00000395454 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
SCAF11-204ENST00000395454 SPXQ9BT56 116 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 ST20Q9HBF5 79 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 C1orf158Q8N1D5 194 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
SCAF11-204ENST00000395454 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 TRBV27A0A0K0K1C4 114 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 TCAPO15273 167 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 ATP5LO75964 103 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-204ENST00000395454 LINC01587Q99440 93 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 UQCR10Q9UDW1 63 aa10.91□□□□□ -0.66
SCAF11-204ENST00000395454 A8MWV9 139 aa10.9□□□□□ -0.66
SCAF11-204ENST00000395454 A8MZ25 164 aa10.9□□□□□ -0.66
SCAF11-204ENST00000395454 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-204ENST00000395454 TOMM6Q96B49 74 aa10.9□□□□□ -0.67
SCAF11-204ENST00000395454 CSTL1Q9H114 145 aa10.9□□□□□ -0.67
SCAF11-204ENST00000395454 XCL2Q9UBD3 114 aa10.9□□□□□ -0.67
SCAF11-204ENST00000395454 PRKDCP78527 4128 aaKnown RBP10.9□□□□□ -0.67
SCAF11-204ENST00000395454 FAM74A4Q5TZK3 123 aa10.89□□□□□ -0.67
SCAF11-204ENST00000395454 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
SCAF11-204ENST00000395454 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 VCYO14598 125 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-204ENST00000395454 RNASE8Q8TDE3 154 aaKnown RBP10.88□□□□□ -0.67
SCAF11-204ENST00000395454 GOLT1BQ9Y3E0 138 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 F5H697 171 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 NUDT3O95989 172 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 APOC4P55056 127 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 ODF1Q14990 250 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 ZNF56Q15929 161 aa10.88□□□□□ -0.67
SCAF11-204ENST00000395454 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 H0Y8G0 127 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 PRM2P04554 102 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 HTN1P15515 57 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 C18orf15Q96N68 181 aa10.87□□□□□ -0.67
SCAF11-204ENST00000395454 HSBP1L1C9JCN9 74 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 H7C1H1 209 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 RHODO00212 210 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 G0S2P27469 103 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 CSNK1G2-AS1Q8NCQ2 148 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 PMCHL2Q9BQD1 86 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 C1QTNF4Q9BXJ3 329 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
SCAF11-204ENST00000395454 TMEM263Q8WUH6 116 aaKnown RBP10.86□□□□□ -0.67
SCAF11-204ENST00000395454 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
SCAF11-204ENST00000395454 RS1O15537 224 aa10.85□□□□□ -0.67
SCAF11-204ENST00000395454 AZU1P20160 251 aa10.85□□□□□ -0.67
SCAF11-204ENST00000395454 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
SCAF11-204ENST00000395454 C2orf66Q6UXQ4 117 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 KIR2DL4Q99706 377 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-204ENST00000395454 DEFB135Q30KP9 77 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 ERASQ7Z444 233 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
SCAF11-204ENST00000395454 MRPS16Q9Y3D3 137 aaKnown RBP10.84□□□□□ -0.67
SCAF11-204ENST00000395454 FBN3Q75N90 2809 aa10.83□□□□□ -0.68
SCAF11-204ENST00000395454 RHOHQ15669 191 aa10.83□□□□□ -0.68
SCAF11-204ENST00000395454 SBSPONQ8IVN8 264 aa10.83□□□□□ -0.68
SCAF11-204ENST00000395454 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
SCAF11-204ENST00000395454 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
SCAF11-204ENST00000395454 A0A087WX48 190 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 IGHV3-53P01767 116 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 PRSS1P07477 247 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
SCAF11-204ENST00000395454 Q6ZN92 141 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 M0R143 59 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 EREGO14944 169 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 SCGB3A1Q96QR1 104 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
SCAF11-204ENST00000395454 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
SCAF11-204ENST00000395454 DNAH9Q9NYC9 4486 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 TSHBP01222 138 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
SCAF11-204ENST00000395454 I3L3M4 83 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 COX8AP10176 69 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
SCAF11-204ENST00000395454 ANKRD39Q53RE8 183 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 DPM2O94777 84 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 SLC25A34Q6PIV7 304 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 B9D2Q9BPU9 175 aa10.8□□□□□ -0.68
SCAF11-204ENST00000395454 IGKCP01834 107 aa10.79□□□□□ -0.68
SCAF11-204ENST00000395454 FGF6P10767 208 aa10.79□□□□□ -0.68
SCAF11-204ENST00000395454 PLNP26678 52 aa10.79□□□□□ -0.68
SCAF11-204ENST00000395454 Q6ZSN1 163 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms