RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 CFHR3Q02985 330 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
RTN4-206ENST00000394611 RASL10AQ92737 203 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 UBE2E2Q96LR5 201 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 BPESC1Q9GZL8 116 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 UTP20O75691 2785 aaKnown RBP6.72□□□□□ -1.33
RTN4-206ENST00000394611 UBR5O95071 2799 aaPredicted RBP6.72□□□□□ -1.33
RTN4-206ENST00000394611 H3BUX3 64 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 BUB3O43684 328 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 Q8N1Y9 231 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 IGHV7-81A0A0B4J1V7 117 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 VCYO14598 125 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 NPFFO15130 113 aa6.71□□□□□ -1.33
RTN4-206ENST00000394611 IGLC6P0CF74 106 aa6.71□□□□□ -1.33
RTN4-206ENST00000394611 PLA2G2AP14555 144 aa6.71□□□□□ -1.33
RTN4-206ENST00000394611 IGLV11-55A0A075B6I3 123 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 IGKV3D-7A0A0C4DH55 119 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 CFAP126Q5VTH2 177 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 TENM4Q6N022 2769 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
RTN4-206ENST00000394611 ID1P41134 155 aa6.7□□□□□ -1.34
RTN4-206ENST00000394611 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
RTN4-206ENST00000394611 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
RTN4-206ENST00000394611 MDFICQ9P1T7 246 aa6.7□□□□□ -1.34
RTN4-206ENST00000394611 EDN2P20800 178 aa6.7□□□□□ -1.34
RTN4-206ENST00000394611 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
RTN4-206ENST00000394611 Q9HAA7 133 aa6.7□□□□□ -1.34
RTN4-206ENST00000394611 PFN2P35080 140 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 UBE2E1P51965 193 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 LINC01587Q99440 93 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 SHISA9B4DS77 424 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 M0R1W7 72 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
RTN4-206ENST00000394611 PROK1P58294 105 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 TSPEAR-AS2P59090 65 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 BLCAPP62952 87 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 PRIMA1Q86XR5 153 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 LINC00311Q8N616 119 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 KLK5Q9Y337 293 aaPredicted RBP6.69□□□□□ -1.34
RTN4-206ENST00000394611 MRPS12O15235 138 aaKnown RBP6.69□□□□□ -1.34
RTN4-206ENST00000394611 NUP37Q8NFH4 326 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 C20orf173Q96LM9 149 aa6.69□□□□□ -1.34
RTN4-206ENST00000394611 HELZ2Q9BYK8 2649 aaKnown RBP6.69□□□□□ -1.34
RTN4-206ENST00000394611 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 C19orf84I3L1E1 186 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 J3QKU1 62 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 TAL2Q16559 108 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 A0A0J9YY99 117 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 SNRPD3P62318 126 aaKnown RBP6.68□□□□□ -1.34
RTN4-206ENST00000394611 FHL3Q13643 280 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 DEFB136Q30KP8 78 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 ZFP36P26651 326 aaKnown RBP6.68□□□□□ -1.34
RTN4-206ENST00000394611 LINC01559Q495D7 138 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 TCTEX1D4Q5JR98 221 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 C9orf139Q6ZV77 190 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 NRACQ8N912 160 aa6.68□□□□□ -1.34
RTN4-206ENST00000394611 GCN1Q92616 2671 aaKnown RBP6.67□□□□□ -1.34
RTN4-206ENST00000394611 LINC00158P58513 81 aa6.67□□□□□ -1.34
RTN4-206ENST00000394611 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
RTN4-206ENST00000394611 DYNLRB2Q8TF09 96 aa6.67□□□□□ -1.34
RTN4-206ENST00000394611 NXPH4O95158 308 aa6.67□□□□□ -1.34
RTN4-206ENST00000394611 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.66□□□□□ -1.34
RTN4-206ENST00000394611 TRIAP1O43715 76 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 ZNF22P17026 224 aaPredicted RBP6.66□□□□□ -1.34
RTN4-206ENST00000394611 RPL32P62910 135 aaKnown RBP6.66□□□□□ -1.34
RTN4-206ENST00000394611 NSUN5P1Q3KNT7 163 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 NEXN-AS1Q8NBZ9 246 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 XCL2Q9UBD3 114 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 ELANEP08246 267 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 UBE2L6O14933 153 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 FBXL19-AS1Q494R0 122 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
RTN4-206ENST00000394611 PAX4O43316 350 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.34
RTN4-206ENST00000394611 DEFB131AP59861 70 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 Q8N9W7 124 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 ZNRF2Q8NHG8 242 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 Q9H8V8 135 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 U3KQK5 164 aa6.65□□□□□ -1.34
RTN4-206ENST00000394611 TRGV1A0A0A0MS02 117 aa6.65□□□□□ -1.35
RTN4-206ENST00000394611 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.35
RTN4-206ENST00000394611 OVOL1O14753 267 aa6.65□□□□□ -1.35
RTN4-206ENST00000394611 ATP5J2P56134 94 aa6.65□□□□□ -1.35
RTN4-206ENST00000394611 MRGPRG-AS1Q2M3A8 158 aa6.65□□□□□ -1.35
RTN4-206ENST00000394611 CLPSL1A2RUU4 121 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms