RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 RPL39LQ96EH5 51 aaKnown RBP16.42■□□□□ 0.22
CLDND1-202ENST00000394180 UBTD1Q9HAC8 227 aa16.42■□□□□ 0.22
CLDND1-202ENST00000394180 IGHV1-69P01742 117 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 LINC00643Q86TS7 51 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 TP53TG1Q9Y2A0 90 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 NBPF19A0A087WUL8 3843 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 ELANEP08246 267 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 TMEM219Q86XT9 240 aa16.41■□□□□ 0.22
CLDND1-202ENST00000394180 FBN2P35556 2912 aa16.4■□□□□ 0.22
CLDND1-202ENST00000394180 CCL17Q92583 94 aa16.4■□□□□ 0.22
CLDND1-202ENST00000394180 ZFAND3Q9H8U3 227 aa16.4■□□□□ 0.22
CLDND1-202ENST00000394180 ICOSQ9Y6W8 199 aa16.4■□□□□ 0.22
CLDND1-202ENST00000394180 FAM236AA0A1B0GUQ0 79 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 FAM236BA0A1B0GV22 79 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 LST1O00453 97 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 LY6HO94772 140 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 ATP5J2P56134 94 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 OR13C6PQ8NH95 151 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 ZNRF2Q8NHG8 242 aa16.39■□□□□ 0.22
CLDND1-202ENST00000394180 POLR2KP53803 58 aaKnown RBP16.39■□□□□ 0.21
CLDND1-202ENST00000394180 KLK9Q2XQG4 91 aa16.39■□□□□ 0.21
CLDND1-202ENST00000394180 SDIM1Q6ZPB5 146 aa16.39■□□□□ 0.21
CLDND1-202ENST00000394180 C14orf178Q8N769 122 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-202ENST00000394180 KLK9Q9UKQ9 250 aa16.39■□□□□ 0.21
CLDND1-202ENST00000394180 LYNX1G3V0Z9 82 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 VCYO14598 125 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 LYNX1P0DP58 116 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 HERVK_113P63121 156 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 C11orf71Q6IPW1 123 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 MALRD1Q5VYJ5 2156 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 TRGV11A0A075B6L2 103 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 NXPH4O95158 308 aa16.38■□□□□ 0.21
CLDND1-202ENST00000394180 SPG11Q96JI7 2443 aa16.37■□□□□ 0.21
CLDND1-202ENST00000394180 J3QKU1 62 aa16.37■□□□□ 0.21
CLDND1-202ENST00000394180 MAP1AP78559 2803 aaPredicted RBP16.37■□□□□ 0.21
CLDND1-202ENST00000394180 GCN1Q92616 2671 aaKnown RBP16.37■□□□□ 0.21
CLDND1-202ENST00000394180 TRAV25A0A0B4J276 109 aa16.37■□□□□ 0.21
CLDND1-202ENST00000394180 EMP1P54849 157 aa16.37■□□□□ 0.21
CLDND1-202ENST00000394180 CRYGAP11844 174 aa16.36■□□□□ 0.21
CLDND1-202ENST00000394180 TRAV21A0A0B4J279 112 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 DOPEY2Q9Y3R5 2298 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 H7C2G1 150 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 RNF182Q8N6D2 247 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 PHLDA3Q9Y5J5 127 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 S4R3C0 116 aa16.35■□□□□ 0.21
CLDND1-202ENST00000394180 COX7CP15954 63 aa16.34■□□□□ 0.21
CLDND1-202ENST00000394180 LINC00477Q96M19 166 aa16.34■□□□□ 0.21
CLDND1-202ENST00000394180 ZNF256Q9Y2P7 627 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-202ENST00000394180 FAM19A5Q7Z5A7 132 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-202ENST00000394180 ABCA1O95477 2261 aa16.33■□□□□ 0.2
CLDND1-202ENST00000394180 TRBV6-5A0A0K0K1A5 114 aa16.33■□□□□ 0.2
CLDND1-202ENST00000394180 A0A0J9YXY3 114 aa16.32■□□□□ 0.2
CLDND1-202ENST00000394180 C5orf38Q86SI9 138 aa16.32■□□□□ 0.2
CLDND1-202ENST00000394180 DUX3Q96PT4 197 aa16.32■□□□□ 0.2
CLDND1-202ENST00000394180 TRBV27A0A0K0K1C4 114 aa16.31■□□□□ 0.2
CLDND1-202ENST00000394180 MGPP08493 103 aa16.31■□□□□ 0.2
CLDND1-202ENST00000394180 S100A4P26447 101 aaKnown RBP16.31■□□□□ 0.2
CLDND1-202ENST00000394180 RHOHQ15669 191 aa16.31■□□□□ 0.2
CLDND1-202ENST00000394180 KIF25-AS1Q9Y6Z4 181 aa16.31■□□□□ 0.2
CLDND1-202ENST00000394180 CSMD1Q96PZ7 3565 aa16.3■□□□□ 0.2
CLDND1-202ENST00000394180 OOSP1A8MZH6 123 aa16.3■□□□□ 0.2
CLDND1-202ENST00000394180 DPM3Q9P2X0 92 aa16.3■□□□□ 0.2
CLDND1-202ENST00000394180 UBE2E1P51965 193 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 LITAFQ99732 161 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 POLQO75417 2590 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 ZNF22P17026 224 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-202ENST00000394180 LINC00315P59091 139 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 NSUN5P1Q3KNT7 163 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 C9orf139Q6ZV77 190 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 APRG1Q8IVJ8 170 aa16.29■□□□□ 0.2
CLDND1-202ENST00000394180 BEX4Q9NWD9 120 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-202ENST00000394180 SVEP1Q4LDE5 3571 aa16.28■□□□□ 0.2
CLDND1-202ENST00000394180 ABCA12Q86UK0 2595 aa16.28■□□□□ 0.2
CLDND1-202ENST00000394180 PTPN13Q12923 2485 aa16.28■□□□□ 0.2
CLDND1-202ENST00000394180 DCANP1Q8TF63 244 aa16.28■□□□□ 0.2
CLDND1-202ENST00000394180 U3KQE9 123 aa16.28■□□□□ 0.2
CLDND1-202ENST00000394180 ZFAND2AQ8N6M9 145 aa16.27■□□□□ 0.19
CLDND1-202ENST00000394180 PEMTQ9UBM1 199 aa16.27■□□□□ 0.19
CLDND1-202ENST00000394180 CLPSL1A2RUU4 121 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 GAGE2AQ6NT46 116 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 ATOX1O00244 68 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 COX7A1P24310 79 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 HIST1H4AP62805 103 aaKnown RBP16.26■□□□□ 0.19
CLDND1-202ENST00000394180 PRR9Q5T870 116 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 C3orf56Q8N813 242 aa16.26■□□□□ 0.19
CLDND1-202ENST00000394180 FASNP49327 2511 aaKnown RBP16.25■□□□□ 0.19
CLDND1-202ENST00000394180 LOC107984640A0A0U1RRK4 108 aa16.25■□□□□ 0.19
CLDND1-202ENST00000394180 OVOL1O14753 267 aa16.25■□□□□ 0.19
CLDND1-202ENST00000394180 LINC00527Q9UJ94 153 aa16.25■□□□□ 0.19
CLDND1-202ENST00000394180 TIMM17BO60830 172 aa16.25■□□□□ 0.19
CLDND1-202ENST00000394180 RPL39P62891 51 aaKnown RBP16.24■□□□□ 0.19
CLDND1-202ENST00000394180 MIAQ16674 131 aa16.24■□□□□ 0.19
CLDND1-202ENST00000394180 HIST2H2BCQ6DN03 193 aa16.24■□□□□ 0.19
CLDND1-202ENST00000394180 C2orf48Q96LS8 159 aa16.24■□□□□ 0.19
CLDND1-202ENST00000394180 CEMP1Q6PRD7 247 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-202ENST00000394180 CCL19Q99731 98 aa16.23■□□□□ 0.19
CLDND1-202ENST00000394180 IGHV3-23P01764 117 aa16.23■□□□□ 0.19
CLDND1-202ENST00000394180 DAND5Q8N907 189 aa16.23■□□□□ 0.19
CLDND1-202ENST00000394180 APCP25054 2843 aa16.23■□□□□ 0.19
CLDND1-202ENST00000394180 TMEM258P61165 79 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms