RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 DEFB108BQ8NET1 73 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 RITA1Q96K30 269 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 GAFA1Q96PS6 74 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 CCL19Q99731 98 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 PAXXQ9BUH6 204 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 C11orf68Q9H3H3 251 aaKnown RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 DKK2Q9UBU2 259 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGSF10Q6WRI0 2623 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ABCA1O95477 2261 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV19A0A075B6N1 114 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1D-17A0A075B6S4 117 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 TRAV41A0A0B4J266 112 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 TRAV40A0A0B4J280 105 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV7-6A0A0J9YX20 115 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV30A0A0K0K1B3 111 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 WI2-2373I1.2A0A1W2PRP0 233 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 PLAC8L1A1L4L8 177 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 LINC01546A6NGU7 62 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 LYRM9A8MSI8 78 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 C12orf77C9JDV5 145 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 H3BTX0 84 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 M0R3E3 92 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 NDUFA3O95167 84 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1-39P01597 117 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1D-39P04432 117 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 COX6B1P14854 86 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 GATA1P15976 413 aaPredicted RBP2□□□□□ -2.09
TRAV41-201ENST00000390468 SLC25A16P16260 332 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 MYCNOSP40205 109 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 SUB1P53999 127 aaKnown RBP eCLIP2□□□□□ -2.09
TRAV41-201ENST00000390468 DAZAP2Q15038 168 aaPredicted RBP2□□□□□ -2.09
TRAV41-201ENST00000390468 C10orf113Q5VZT2 155 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 C11orf71Q6IPW1 123 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 C5orf38Q86SI9 138 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 CD177Q8N6Q3 437 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 Q8N8P6 123 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 DAND5Q8N907 189 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 C2orf48Q96LS8 159 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 Q96MF0 132 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF714Q96N38 554 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 CCL13Q99616 98 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 OTORQ9NRC9 128 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 LSM4Q9Y4Z0 139 aaKnown RBP2□□□□□ -2.09
TRAV41-201ENST00000390468 U3KQK5 164 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 SPTAN1Q13813 2472 aaKnown RBP2□□□□□ -2.09
TRAV41-201ENST00000390468 AKAP9Q99996 3911 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 HRNRQ86YZ3 2850 aaPredicted RBP2□□□□□ -2.09
TRAV41-201ENST00000390468 EPG5Q9HCE0 2579 aa2□□□□□ -2.09
TRAV41-201ENST00000390468 DOPEY1Q5JWR5 2465 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF469Q96JG9 3925 aaPredicted RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 CSPG4Q6UVK1 2322 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 A0A096LNJ9 63 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 TRAV3A0A0B4J244 114 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1-6A0A0C4DH72 117 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV6-1A0A0K0K1D8 114 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 PRSS46E5RG02 174 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 LYNX1G3V0Z9 82 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 K7EMI3 77 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 UPK2O00526 184 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 BCE1O60756 84 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 TIMM17BO60830 172 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 OXTP01178 125 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 LYNX1P0DP58 116 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 KRTAP10-7P60409 375 aaPredicted RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 SNRPD3P62318 126 aaKnown RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 CFHR3Q02985 330 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 LAGE3Q14657 143 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 C17orf58Q2M2W7 97 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 TMEM30BQ3MIR4 351 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 Q6JHZ5 121 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 LYPD2Q6UXB3 125 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 SDIM1Q6ZPB5 146 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 Q6ZRU5 148 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 Q86TA4 180 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 Q8N7P7 452 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 SLC25A29Q8N8R3 303 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 NEXN-AS1Q8NBZ9 246 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 DYNLRB2Q8TF09 96 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 SRSF12Q8WXF0 261 aaKnown RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 OVOL2Q9BRP0 275 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 DCTN5Q9BTE1 182 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 TTTY13Q9BZ97 58 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 KLK15Q9H2R5 256 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 DAZ1Q9NQZ3 744 aaKnown RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 MRPL35Q9NZE8 188 aaKnown RBP1.99□□□□□ -2.09
TRAV41-201ENST00000390468 KAAG1Q9UBP8 84 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 CTSZQ9UBR2 303 aa1.99□□□□□ -2.09
TRAV41-201ENST00000390468 SPG11Q96JI7 2443 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 A0A1W2PPR1 153 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 SRRM4A7MD48 611 aaKnown RBP1.98□□□□□ -2.09
TRAV41-201ENST00000390468 EPM2AB3EWF7 344 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 USP17L23D6RBM5 183 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 H7C2G1 150 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 J3QKU1 62 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 NDUFS5O43920 106 aa1.98□□□□□ -2.09
TRAV41-201ENST00000390468 LY6HO94772 140 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms