RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 IGHV3-33P01772 117 aa14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 IGHV3-30-5P0DP03 117 aa14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 DEFB1P60022 68 aa14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 B5MCH6 92 aa14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 FUSP35637 526 aaKnown RBP eCLIP14.3□□□□□ -0.12
CNTNAP3B-203ENST00000377561 A0A0J9YXV3 536 aa14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 TIRAPP58753 221 aa14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 MBD6Q96DN6 1003 aa14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 LRP4O75096 1905 aa14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 GDF5OSQ5U4N7 250 aa14.29□□□□□ -0.12
CNTNAP3B-203ENST00000377561 LY6LH3BQJ8 138 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 TMEM258P61165 79 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 RBM3P98179 157 aaKnown RBP14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 HIST2H2BCQ6DN03 193 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 BAALCQ8WXS3 180 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 TIMM17AQ99595 171 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 RPL39P62891 51 aaKnown RBP14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 ODF1Q14990 250 aa14.28□□□□□ -0.12
CNTNAP3B-203ENST00000377561 RS1O15537 224 aa14.27□□□□□ -0.12
CNTNAP3B-203ENST00000377561 LINC01548A6NM66 108 aa14.27□□□□□ -0.13
CNTNAP3B-203ENST00000377561 TNFRSF13BO14836 293 aaPredicted RBP14.27□□□□□ -0.13
CNTNAP3B-203ENST00000377561 SPATA12Q7Z6I5 190 aa14.27□□□□□ -0.13
CNTNAP3B-203ENST00000377561 SND1-IT1Q9HBX3 110 aa14.27□□□□□ -0.13
CNTNAP3B-203ENST00000377561 TTTY13Q9BZ97 58 aa14.26□□□□□ -0.13
CNTNAP3B-203ENST00000377561 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
CNTNAP3B-203ENST00000377561 ESM1Q9NQ30 184 aa14.26□□□□□ -0.13
CNTNAP3B-203ENST00000377561 A0A0J9YX75 114 aa14.26□□□□□ -0.13
CNTNAP3B-203ENST00000377561 EBI3Q14213 229 aa14.26□□□□□ -0.13
CNTNAP3B-203ENST00000377561 FXYD2P54710 66 aa14.25□□□□□ -0.13
CNTNAP3B-203ENST00000377561 WFDC2Q14508 124 aa14.25□□□□□ -0.13
CNTNAP3B-203ENST00000377561 E9PLD3 99 aa14.25□□□□□ -0.13
CNTNAP3B-203ENST00000377561 H0YGX0 51 aa14.24□□□□□ -0.13
CNTNAP3B-203ENST00000377561 IGLC6P0CF74 106 aa14.24□□□□□ -0.13
CNTNAP3B-203ENST00000377561 IGF1P05019 195 aa14.24□□□□□ -0.13
CNTNAP3B-203ENST00000377561 COX7B2Q8TF08 81 aa14.24□□□□□ -0.13
CNTNAP3B-203ENST00000377561 C4orf3Q8WVX3 66 aa14.24□□□□□ -0.13
CNTNAP3B-203ENST00000377561 G3V4G9 280 aa14.23□□□□□ -0.13
CNTNAP3B-203ENST00000377561 F8W735 103 aaPredicted RBP14.23□□□□□ -0.13
CNTNAP3B-203ENST00000377561 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
CNTNAP3B-203ENST00000377561 OPRPNQ99935 248 aaPredicted RBP14.23□□□□□ -0.13
CNTNAP3B-203ENST00000377561 PRORYQ9H606 182 aa14.23□□□□□ -0.13
CNTNAP3B-203ENST00000377561 C19orf84I3L1E1 186 aa14.22□□□□□ -0.13
CNTNAP3B-203ENST00000377561 MYCNOSP40205 109 aa14.22□□□□□ -0.13
CNTNAP3B-203ENST00000377561 HHLA3Q9XRX5 114 aa14.22□□□□□ -0.13
CNTNAP3B-203ENST00000377561 MUSTN1Q8IVN3 82 aa14.22□□□□□ -0.13
CNTNAP3B-203ENST00000377561 MDFICQ9P1T7 246 aa14.22□□□□□ -0.13
CNTNAP3B-203ENST00000377561 NDUFB1O75438 58 aa14.21□□□□□ -0.13
CNTNAP3B-203ENST00000377561 A4D1N5 150 aa14.21□□□□□ -0.13
CNTNAP3B-203ENST00000377561 ACYP1P07311 99 aa14.21□□□□□ -0.13
CNTNAP3B-203ENST00000377561 TRBV7-3A0A075B6L6 115 aa14.21□□□□□ -0.13
CNTNAP3B-203ENST00000377561 IGHV4-28A0A0C4DH34 117 aa14.21□□□□□ -0.14
CNTNAP3B-203ENST00000377561 NDUFA1O15239 70 aa14.21□□□□□ -0.14
CNTNAP3B-203ENST00000377561 C11orf86A6NJI1 115 aa14.2□□□□□ -0.14
CNTNAP3B-203ENST00000377561 C11orf71Q6IPW1 123 aa14.2□□□□□ -0.14
CNTNAP3B-203ENST00000377561 SPANXCQ9NY87 97 aa14.2□□□□□ -0.14
CNTNAP3B-203ENST00000377561 CHKB-CPT1BH3BT56 60 aa14.19□□□□□ -0.14
CNTNAP3B-203ENST00000377561 TMEM61Q8N0U2 210 aa14.19□□□□□ -0.14
CNTNAP3B-203ENST00000377561 C5orf47Q569G3 176 aa14.19□□□□□ -0.14
CNTNAP3B-203ENST00000377561 KIAA1549Q9HCM3 1950 aa14.19□□□□□ -0.14
CNTNAP3B-203ENST00000377561 CLPSL1A2RUU4 121 aa14.19□□□□□ -0.14
CNTNAP3B-203ENST00000377561 DEFB135Q30KP9 77 aa14.18□□□□□ -0.14
CNTNAP3B-203ENST00000377561 C20orf203Q8NBC4 194 aa14.18□□□□□ -0.14
CNTNAP3B-203ENST00000377561 ZFAND3Q9H8U3 227 aa14.18□□□□□ -0.14
CNTNAP3B-203ENST00000377561 TM2D2Q9BX73 214 aa14.17□□□□□ -0.14
CNTNAP3B-203ENST00000377561 UBE2AP49459 152 aa14.17□□□□□ -0.14
CNTNAP3B-203ENST00000377561 VSIG2Q96IQ7 327 aa14.17□□□□□ -0.14
CNTNAP3B-203ENST00000377561 ODF3Q96PU9 254 aa14.17□□□□□ -0.14
CNTNAP3B-203ENST00000377561 TP53TG3Q9ULZ0 132 aa14.17□□□□□ -0.14
CNTNAP3B-203ENST00000377561 ATG2AQ2TAZ0 1938 aa14.16□□□□□ -0.14
CNTNAP3B-203ENST00000377561 CRIP1P50238 77 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 MP68P56378 58 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 CACNA1AO00555 2505 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 SMAD5-AS1Q9Y6J3 95 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 H3BQ85 93 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 SMIM20Q8N5G0 67 aa14.15□□□□□ -0.14
CNTNAP3B-203ENST00000377561 DEFB4AO15263 64 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 CXCL5P42830 114 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 NREPQ16612 68 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 HCFC1P51610 2035 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 CSPG4Q6UVK1 2322 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 FOXI1Q12951 378 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 NACAE9PAV3 2078 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 NCR3O14931 201 aa14.14□□□□□ -0.15
CNTNAP3B-203ENST00000377561 DAND5Q8N907 189 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 MAP6D1Q9H9H5 199 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 TP73-AS1Q9UF72 201 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 IGLV2-11P01706 119 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 TEN1Q86WV5 123 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 KLK5Q9Y337 293 aaPredicted RBP14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 A0A1B0GX51 115 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 LGALS9O00182 355 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 SPAG11BQ08648 103 aa14.13□□□□□ -0.15
CNTNAP3B-203ENST00000377561 PLXNB1O43157 2135 aa14.12□□□□□ -0.15
CNTNAP3B-203ENST00000377561 C20orf173Q96LM9 149 aa14.12□□□□□ -0.15
CNTNAP3B-203ENST00000377561 KLK12Q9UKR0 248 aa14.12□□□□□ -0.15
CNTNAP3B-203ENST00000377561 K7EQG2 157 aa14.11□□□□□ -0.15
CNTNAP3B-203ENST00000377561 Q8N6K4 173 aa14.11□□□□□ -0.15
CNTNAP3B-203ENST00000377561 C4orf48Q5BLP8 95 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms