RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 H0YGX0 51 aa18.24■□□□□ 0.51
RAPGEF1-203ENST00000372195 TRBV10-2A0A0K0K1G8 114 aa18.24■□□□□ 0.51
RAPGEF1-203ENST00000372195 Q6ZUT4 128 aa18.24■□□□□ 0.51
RAPGEF1-203ENST00000372195 PCNX1Q96RV3 2341 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 CCL18P55774 89 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 Q6ZPA2 131 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 CACNA1GO43497 2377 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 ABCA4P78363 2273 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 ATOX1O00244 68 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 NREPQ16612 68 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 C4orf3Q8WVX3 66 aa18.23■□□□□ 0.51
RAPGEF1-203ENST00000372195 CRYGBP07316 175 aa18.22■□□□□ 0.51
RAPGEF1-203ENST00000372195 TCL1BO95988 128 aa18.22■□□□□ 0.51
RAPGEF1-203ENST00000372195 KIAA1549LQ6ZVL6 1849 aa18.21■□□□□ 0.51
RAPGEF1-203ENST00000372195 CHKB-CPT1BH3BT56 60 aa18.21■□□□□ 0.51
RAPGEF1-203ENST00000372195 CCDC140Q96MF4 163 aa18.21■□□□□ 0.51
RAPGEF1-203ENST00000372195 C14orf132Q9NPU4 83 aa18.2■□□□□ 0.5
RAPGEF1-203ENST00000372195 SHANK1Q9Y566 2161 aa18.2■□□□□ 0.5
RAPGEF1-203ENST00000372195 TRAV26-1A0A087WT03 109 aa18.2■□□□□ 0.5
RAPGEF1-203ENST00000372195 NDUFA1O15239 70 aa18.2■□□□□ 0.5
RAPGEF1-203ENST00000372195 C2orf16Q68DN1 1984 aa18.2■□□□□ 0.5
RAPGEF1-203ENST00000372195 GPHB5Q86YW7 130 aa18.19■□□□□ 0.5
RAPGEF1-203ENST00000372195 IGHV1-58A0A0C4DH39 117 aa18.19■□□□□ 0.5
RAPGEF1-203ENST00000372195 UBE2AP49459 152 aa18.19■□□□□ 0.5
RAPGEF1-203ENST00000372195 IGLV2-8P01709 118 aa18.19■□□□□ 0.5
RAPGEF1-203ENST00000372195 SPAG11BQ08648 103 aa18.19■□□□□ 0.5
RAPGEF1-203ENST00000372195 BRWD1-AS2P59051 145 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 IGKV2D-26A0A0A0MRZ7 120 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 IGF1P05019 195 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 NDUFA11Q86Y39 141 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 K7EMT4 169 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 HIGD2BQ4VC39 106 aa18.18■□□□□ 0.5
RAPGEF1-203ENST00000372195 MAP6D1Q9H9H5 199 aa18.16■□□□□ 0.5
RAPGEF1-203ENST00000372195 A0A0J9YX75 114 aa18.16■□□□□ 0.5
RAPGEF1-203ENST00000372195 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■□ 19.9
RAPGEF1-203ENST00000372195 C20orf173Q96LM9 149 aa18.15■□□□□ 0.5
RAPGEF1-203ENST00000372195 J3KT08 172 aa18.14■□□□□ 0.5
RAPGEF1-203ENST00000372195 C20orf203Q8NBC4 194 aa18.14■□□□□ 0.49
RAPGEF1-203ENST00000372195 A6NDX4 124 aa18.13■□□□□ 0.49
RAPGEF1-203ENST00000372195 MED14OSP0DP75 135 aa18.13■□□□□ 0.49
RAPGEF1-203ENST00000372195 NOTCH3Q9UM47 2321 aa18.13■□□□□ 0.49
RAPGEF1-203ENST00000372195 Q8NA96 180 aa18.13■□□□□ 0.49
RAPGEF1-203ENST00000372195 RIF1Q5UIP0 2472 aaKnown RBP18.13■□□□□ 0.49
RAPGEF1-203ENST00000372195 ZNF295-AS1Q8N0V1 137 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 RNF183Q96D59 192 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 DIRC1Q969H9 104 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 SPRY4Q9C004 299 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 TRAV23DV6A0A075B6W5 121 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 C22orf34Q6ZV56 151 aa18.12■□□□□ 0.49
RAPGEF1-203ENST00000372195 TRBV6-1A0A0K0K1D8 114 aa18.11■□□□□ 0.49
RAPGEF1-203ENST00000372195 A0A1B0GXF2 115 aa18.11■□□□□ 0.49
RAPGEF1-203ENST00000372195 MT-ATP8P03928 68 aa18.11■□□□□ 0.49
RAPGEF1-203ENST00000372195 Q6ZTI0 123 aa18.11■□□□□ 0.49
RAPGEF1-203ENST00000372195 P0C879 139 aa18.11■□□□□ 0.49
RAPGEF1-203ENST00000372195 TMEM263Q8WUH6 116 aaKnown RBP18.1■□□□□ 0.49
RAPGEF1-203ENST00000372195 NBASA2RRP1 2371 aa18.1■□□□□ 0.49
RAPGEF1-203ENST00000372195 SPTAN1Q13813 2472 aaKnown RBP18.1■□□□□ 0.49
RAPGEF1-203ENST00000372195 C19orf84I3L1E1 186 aa18.1■□□□□ 0.49
RAPGEF1-203ENST00000372195 TEX49A0A1B0GTD5 131 aa18.09■□□□□ 0.49
RAPGEF1-203ENST00000372195 DNAJC9-AS1A6NH13 148 aa18.09■□□□□ 0.49
RAPGEF1-203ENST00000372195 MP68P56378 58 aa18.09■□□□□ 0.49
RAPGEF1-203ENST00000372195 IGF2-ASQ6U949 168 aa18.09■□□□□ 0.49
RAPGEF1-203ENST00000372195 CRIP3Q6Q6R5 217 aa18.09■□□□□ 0.49
RAPGEF1-203ENST00000372195 A0A0J9YXY3 114 aa18.08■□□□□ 0.49
RAPGEF1-203ENST00000372195 LINC00269Q8N2A0 174 aa18.08■□□□□ 0.48
RAPGEF1-203ENST00000372195 LINC00467Q9BRT7 94 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 MIAQ16674 131 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 NDUFB1O75438 58 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 SLPIP03973 132 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 TM2D2Q9BX73 214 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 SPANXCQ9NY87 97 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 DAZAP2Q15038 168 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 TMEM131Q92545 1883 aa18.07■□□□□ 0.48
RAPGEF1-203ENST00000372195 SDIM1Q6ZPB5 146 aa18.06■□□□□ 0.48
RAPGEF1-203ENST00000372195 MYCNOSP40205 109 aa18.06■□□□□ 0.48
RAPGEF1-203ENST00000372195 BRK1Q8WUW1 75 aa18.06■□□□□ 0.48
RAPGEF1-203ENST00000372195 IGKV2-24A0A0C4DH68 120 aa18.05■□□□□ 0.48
RAPGEF1-203ENST00000372195 H0Y9J4 135 aa18.05■□□□□ 0.48
RAPGEF1-203ENST00000372195 NDUFC2O95298 119 aa18.05■□□□□ 0.48
RAPGEF1-203ENST00000372195 JMJD7-PLA2G4BH0Y9G9 81 aa18.05■□□□□ 0.48
RAPGEF1-203ENST00000372195 NUP210LQ5VU65 1888 aa18.04■□□□□ 0.48
RAPGEF1-203ENST00000372195 PROK1P58294 105 aa18.04■□□□□ 0.48
RAPGEF1-203ENST00000372195 H3BT86 120 aa18.04■□□□□ 0.48
RAPGEF1-203ENST00000372195 ODF3BA8MYP8 253 aa18.03■□□□□ 0.48
RAPGEF1-203ENST00000372195 UPK3BQ9BT76 320 aa18.03■□□□□ 0.48
RAPGEF1-203ENST00000372195 TMEM256-PLSCR3K7ERE1 68 aa18.03■□□□□ 0.48
RAPGEF1-203ENST00000372195 SCXQ7RTU7 201 aa18.03■□□□□ 0.48
RAPGEF1-203ENST00000372195 FAM110AQ9BQ89 295 aa18.03■□□□□ 0.48
RAPGEF1-203ENST00000372195 MED13LQ71F56 2210 aa18.02■□□□□ 0.47
RAPGEF1-203ENST00000372195 ZFAND2AQ8N6M9 145 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 C10orf99Q6UWK7 81 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 COX7BP24311 80 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 CRIP1P50238 77 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 MPLKIPQ8TAP9 179 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 MAPKAPK5-AS1Q8N8E1 139 aa18.01■□□□□ 0.47
RAPGEF1-203ENST00000372195 DSCAML1Q8TD84 2053 aa18■□□□□ 0.47
RAPGEF1-203ENST00000372195 PRO0255Q9UI72 69 aa18■□□□□ 0.47
RAPGEF1-203ENST00000372195 CXCL5P42830 114 aa18■□□□□ 0.47
RAPGEF1-203ENST00000372195 SMAD5-AS1Q9Y6J3 95 aa18■□□□□ 0.47
RAPGEF1-203ENST00000372195 A0A096LNI7 61 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms