RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IGHV4-31P0DP07 118 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 TTTY13Q9BZ97 58 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 ACACBO00763 2458 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 PLA2G2EQ9NZK7 142 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 LINC01548A6NM66 108 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 PLA2G5P39877 138 aa13.71□□□□□ -0.21
COL18A1-202ENST00000355480 TMEM258P61165 79 aa13.71□□□□□ -0.22
COL18A1-202ENST00000355480 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.22
COL18A1-202ENST00000355480 MP68P56378 58 aa13.71□□□□□ -0.22
COL18A1-202ENST00000355480 IGKV2-24A0A0C4DH68 120 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 A0A1B0GX51 115 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 TRBV10-1A0A0K0K1A3 114 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 C11orf86A6NJI1 115 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 ODF3BA8MYP8 253 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 IGKV3D-7A0A0C4DH55 119 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 INAFM1C9JVW0 142 aa13.7□□□□□ -0.22
COL18A1-202ENST00000355480 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
COL18A1-202ENST00000355480 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 E9PLD3 99 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 COA6Q5JTJ3 125 aaKnown RBP13.69□□□□□ -0.22
COL18A1-202ENST00000355480 Q6YL49 198 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-202ENST00000355480 C5orf47Q569G3 176 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 LINC01620Q4KN68 170 aa13.69□□□□□ -0.22
COL18A1-202ENST00000355480 KIF26AQ9ULI4 1882 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-202ENST00000355480 TRBV6-1A0A0K0K1D8 114 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 CEMP1Q6PRD7 247 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-202ENST00000355480 Q6ZTI0 123 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 A0A0B4J2C4 111 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 TECTAO75443 2155 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 RNF183Q96D59 192 aa13.68□□□□□ -0.22
COL18A1-202ENST00000355480 FXYD2P54710 66 aa13.67□□□□□ -0.22
COL18A1-202ENST00000355480 C14orf177Q52M58 125 aa13.67□□□□□ -0.22
COL18A1-202ENST00000355480 B9D2Q9BPU9 175 aa13.67□□□□□ -0.22
COL18A1-202ENST00000355480 SPG11Q96JI7 2443 aa13.67□□□□□ -0.22
COL18A1-202ENST00000355480 WFDC9Q8NEX5 89 aa13.67□□□□□ -0.22
COL18A1-202ENST00000355480 TP53TG3Q9ULZ0 132 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 Q6ZUT4 128 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 LGALS9O00182 355 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 FAM222AQ5U5X8 452 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 P0DMU3 169 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
COL18A1-202ENST00000355480 IGKV1D-37A0A075B6S9 117 aa13.65□□□□□ -0.22
COL18A1-202ENST00000355480 JMJD7-PLA2G4BH0Y9G9 81 aa13.65□□□□□ -0.22
COL18A1-202ENST00000355480 LINC00269Q8N2A0 174 aa13.65□□□□□ -0.22
COL18A1-202ENST00000355480 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
COL18A1-202ENST00000355480 PSMB8P28062 276 aa13.65□□□□□ -0.23
COL18A1-202ENST00000355480 C14orf132Q9NPU4 83 aa13.64□□□□□ -0.23
COL18A1-202ENST00000355480 TDRG1Q3Y452 100 aa13.64□□□□□ -0.23
COL18A1-202ENST00000355480 HILS1P60008 231 aa13.64□□□□□ -0.23
COL18A1-202ENST00000355480 CUL9Q8IWT3 2517 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 C19orf71A6NCJ1 209 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 REG3AQ06141 175 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 HIGD1BQ9P298 99 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 ADAMTS9Q9P2N4 1935 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 H0Y9J4 135 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 IGF1P05019 195 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 OTOGLQ3ZCN5 2332 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 COX7BP24311 80 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 ODF1Q14990 250 aa13.63□□□□□ -0.23
COL18A1-202ENST00000355480 ZNF80P51504 273 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-202ENST00000355480 DEFB114Q30KQ6 69 aa13.62□□□□□ -0.23
COL18A1-202ENST00000355480 DEFB131BA0A096LNP1 70 aa13.62□□□□□ -0.23
COL18A1-202ENST00000355480 LYRM9A8MSI8 78 aa13.62□□□□□ -0.23
COL18A1-202ENST00000355480 ZFAND2AQ8N6M9 145 aa13.61□□□□□ -0.23
COL18A1-202ENST00000355480 CRYGDP07320 174 aa13.61□□□□□ -0.23
COL18A1-202ENST00000355480 FRMD6-AS1P0C7T7 363 aa13.61□□□□□ -0.23
COL18A1-202ENST00000355480 NFE4Q86UQ8 179 aa13.61□□□□□ -0.23
COL18A1-202ENST00000355480 HIGD2AQ9BW72 106 aa13.61□□□□□ -0.23
COL18A1-202ENST00000355480 SMIM9A6NGZ8 99 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 TEN1Q86WV5 123 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 FAM110AQ9BQ89 295 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 TMEM256-PLSCR3K7ERE1 68 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 ODF3Q96PU9 254 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 LINC00574Q9H8X3 128 aa13.6□□□□□ -0.23
COL18A1-202ENST00000355480 K7EQG2 157 aa13.59□□□□□ -0.23
COL18A1-202ENST00000355480 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
COL18A1-202ENST00000355480 SPATA25Q9BR10 227 aa13.59□□□□□ -0.23
COL18A1-202ENST00000355480 WNK1Q9H4A3 2382 aa13.59□□□□□ -0.23
COL18A1-202ENST00000355480 CSPG4Q6UVK1 2322 aa13.59□□□□□ -0.23
COL18A1-202ENST00000355480 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
COL18A1-202ENST00000355480 LRCOL1A6NCL2 159 aa13.58□□□□□ -0.24
COL18A1-202ENST00000355480 PLXNB3Q9ULL4 1909 aa13.58□□□□□ -0.24
COL18A1-202ENST00000355480 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 Q6ZSV7 163 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 LINC00482Q8N8I6 264 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 CHCHD10Q8WYQ3 142 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-202ENST00000355480 SONP18583 2426 aaKnown RBP13.57□□□□□ -0.24
COL18A1-202ENST00000355480 P0C879 139 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 SPANXCQ9NY87 97 aa13.57□□□□□ -0.24
COL18A1-202ENST00000355480 ATOX1O00244 68 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms