RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
SRPK1-201ENST00000346162 MRPL53Q96EL3 112 aaKnown RBP11.91□□□□□ -0.5
SRPK1-201ENST00000346162 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
SRPK1-201ENST00000346162 BUB3O43684 328 aa11.91□□□□□ -0.5
SRPK1-201ENST00000346162 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
SRPK1-201ENST00000346162 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
SRPK1-201ENST00000346162 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
SRPK1-201ENST00000346162 MRPS12O15235 138 aaKnown RBP11.91□□□□□ -0.5
SRPK1-201ENST00000346162 ELANEP08246 267 aa11.91□□□□□ -0.5
SRPK1-201ENST00000346162 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
SRPK1-201ENST00000346162 IGHG2P01859 326 aa11.9□□□□□ -0.5
SRPK1-201ENST00000346162 BLCAPP62952 87 aa11.9□□□□□ -0.5
SRPK1-201ENST00000346162 TOMM6Q96B49 74 aa11.9□□□□□ -0.5
SRPK1-201ENST00000346162 NACAE9PAV3 2078 aa11.9□□□□□ -0.5
SRPK1-201ENST00000346162 IGHV4-38-2P0DP08 117 aa11.9□□□□□ -0.51
SRPK1-201ENST00000346162 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
SRPK1-201ENST00000346162 IGHV4-30-2A0A087WSY4 118 aa11.89□□□□□ -0.51
SRPK1-201ENST00000346162 PFN2P35080 140 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
SRPK1-201ENST00000346162 NAV3Q8IVL0 2385 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 WI2-2373I1.2A0A1W2PRP0 233 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 PSMB8P28062 276 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 HRCT1Q6UXD1 115 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 C20orf197Q8N268 126 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 Q6Q795 121 aa11.88□□□□□ -0.51
SRPK1-201ENST00000346162 GNRH2O43555 120 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 DAND5Q8N907 189 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 Q9H8V8 135 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
SRPK1-201ENST00000346162 IGHV3-16A0A0C4DH30 117 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 PRB1P04280 392 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 Q6ZQT7 251 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 LRP4O75096 1905 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 DAZAP2Q15038 168 aaPredicted RBP11.86□□□□□ -0.51
SRPK1-201ENST00000346162 C5orf56Q8N8D9 126 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 C10orf105Q8TEF2 133 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 A0A0J9YY99 117 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 FAM19A5Q7Z5A7 132 aaPredicted RBP11.86□□□□□ -0.51
SRPK1-201ENST00000346162 SLC25A29Q8N8R3 303 aa11.86□□□□□ -0.51
SRPK1-201ENST00000346162 SDIM1Q6ZPB5 146 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
SRPK1-201ENST00000346162 DEFB130BP0DP73 79 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 DEFB130AP0DP74 79 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 COX7CP15954 63 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 CRLF1O75462 422 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 SIRPDQ9H106 197 aa11.84□□□□□ -0.51
SRPK1-201ENST00000346162 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.51
SRPK1-201ENST00000346162 HIVEP3Q5T1R4 2406 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 NFE4Q86UQ8 179 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 ORMDL1Q9P0S3 153 aa11.83□□□□□ -0.52
SRPK1-201ENST00000346162 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
SRPK1-201ENST00000346162 TRAV23DV6A0A075B6W5 121 aa11.82□□□□□ -0.52
SRPK1-201ENST00000346162 ABCA2Q9BZC7 2435 aa11.82□□□□□ -0.52
SRPK1-201ENST00000346162 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
SRPK1-201ENST00000346162 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
SRPK1-201ENST00000346162 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
SRPK1-201ENST00000346162 HCFC1P51610 2035 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 TRIAP1O43715 76 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 LOC107984640A0A0U1RRK4 108 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 P0DMU3 169 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 FAM231AP0DMU4 169 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 FAM231CP0DMU5 169 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 DSCR8Q96T75 97 aa11.81□□□□□ -0.52
SRPK1-201ENST00000346162 H0YGX0 51 aa11.8□□□□□ -0.52
SRPK1-201ENST00000346162 ZNRF2Q8NHG8 242 aa11.8□□□□□ -0.52
SRPK1-201ENST00000346162 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
SRPK1-201ENST00000346162 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
SRPK1-201ENST00000346162 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
SRPK1-201ENST00000346162 CFHR3Q02985 330 aa11.8□□□□□ -0.52
SRPK1-201ENST00000346162 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
SRPK1-201ENST00000346162 NRGNQ92686 78 aa11.8□□□□□ -0.52
SRPK1-201ENST00000346162 SORL1Q92673 2214 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 DSCAMO60469 2012 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
SRPK1-201ENST00000346162 SERP2Q8N6R1 65 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
SRPK1-201ENST00000346162 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 Q9HAA7 133 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 U3KQK5 164 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 AGRNO00468 2067 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 PCNTO95613 3336 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 NXPH4O95158 308 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 LMO4P61968 165 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 ODF3BA8MYP8 253 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 SS18Q15532 418 aa11.78□□□□□ -0.52
SRPK1-201ENST00000346162 IGHV3-30-3P0DP02 117 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms