RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
TSPO-201ENST00000329563 COLCA2A8K830 154 aa10.21□□□□□ -0.77
TSPO-201ENST00000329563 SLAQ13239 276 aa10.21□□□□□ -0.77
TSPO-201ENST00000329563 LINC00588Q9Y4M8 146 aa10.21□□□□□ -0.77
TSPO-201ENST00000329563 KIF25-AS1Q9Y6Z4 181 aa10.21□□□□□ -0.77
TSPO-201ENST00000329563 A0A087WWL8 130 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 TMEM136Q6ZRR5 245 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 C6orf223Q8N319 242 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 JPT2Q9H910 190 aa10.2□□□□□ -0.78
TSPO-201ENST00000329563 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 C16orf90A8MZG2 172 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 F5H697 171 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 H7C1H1 209 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 PPBPP02775 128 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 RAB5AP20339 215 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 SAMD10Q9BYL1 202 aa10.19□□□□□ -0.78
TSPO-201ENST00000329563 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 PPP1R17O96001 155 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 APCSP02743 223 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 MGPP08493 103 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 RAB4AP20338 218 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 LINC00315P59091 139 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 ZNF56Q15929 161 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
TSPO-201ENST00000329563 A0A0J9YY99 117 aa10.17□□□□□ -0.78
TSPO-201ENST00000329563 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
TSPO-201ENST00000329563 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
TSPO-201ENST00000329563 RPS10P46783 165 aaKnown RBP10.17□□□□□ -0.78
TSPO-201ENST00000329563 CKS2P33552 79 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 FABP9Q0Z7S8 132 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 FHL2Q14192 279 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 VSIG2Q96IQ7 327 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
TSPO-201ENST00000329563 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
TSPO-201ENST00000329563 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
TSPO-201ENST00000329563 CDK2AP2O75956 126 aa10.15□□□□□ -0.78
TSPO-201ENST00000329563 GATA1P15976 413 aaPredicted RBP10.15□□□□□ -0.78
TSPO-201ENST00000329563 TNP2Q05952 138 aa10.15□□□□□ -0.78
TSPO-201ENST00000329563 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
TSPO-201ENST00000329563 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
TSPO-201ENST00000329563 TRBV10-1A0A0K0K1A3 114 aa10.14□□□□□ -0.79
TSPO-201ENST00000329563 RHOHQ15669 191 aa10.14□□□□□ -0.79
TSPO-201ENST00000329563 ESRGQ1W209 222 aa10.14□□□□□ -0.79
TSPO-201ENST00000329563 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
TSPO-201ENST00000329563 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
TSPO-201ENST00000329563 H3BNG1 76 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 M0QY20 66 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 PHOX2AO14813 284 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 BTF3P20290 206 aaKnown RBP10.13□□□□□ -0.79
TSPO-201ENST00000329563 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 Q9H8V8 135 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 HSPG2P98160 4391 aa10.13□□□□□ -0.79
TSPO-201ENST00000329563 D6R8Y8 96 aa10.12□□□□□ -0.79
TSPO-201ENST00000329563 K7EQD1 137 aa10.12□□□□□ -0.79
TSPO-201ENST00000329563 CRYBA4P53673 196 aa10.12□□□□□ -0.79
TSPO-201ENST00000329563 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
TSPO-201ENST00000329563 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
TSPO-201ENST00000329563 A0A096LPF7 62 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 PAX4O43316 350 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 TRGC2P03986 189 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.11□□□□□ -0.79
TSPO-201ENST00000329563 PRELID3AQ96N28 172 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 TNFRSF18Q9Y5U5 241 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
TSPO-201ENST00000329563 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
TSPO-201ENST00000329563 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
TSPO-201ENST00000329563 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
TSPO-201ENST00000329563 Q6ZSN1 163 aa10.1□□□□□ -0.79
TSPO-201ENST00000329563 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
TSPO-201ENST00000329563 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
TSPO-201ENST00000329563 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
TSPO-201ENST00000329563 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
TSPO-201ENST00000329563 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
TSPO-201ENST00000329563 MAPKAPK5-AS1Q8N8E1 139 aa10.09□□□□□ -0.79
TSPO-201ENST00000329563 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
TSPO-201ENST00000329563 ST20Q9HBF5 79 aa10.09□□□□□ -0.79
TSPO-201ENST00000329563 MRPS16Q9Y3D3 137 aaKnown RBP10.09□□□□□ -0.79
TSPO-201ENST00000329563 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
TSPO-201ENST00000329563 C1orf196B1AJZ1 125 aa10.08□□□□□ -0.8
TSPO-201ENST00000329563 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
TSPO-201ENST00000329563 NCR2O95944 276 aa10.08□□□□□ -0.8
TSPO-201ENST00000329563 SPATA12Q7Z6I5 190 aa10.08□□□□□ -0.8
TSPO-201ENST00000329563 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
TSPO-201ENST00000329563 SMKR1H3BMG3 65 aa10.07□□□□□ -0.8
TSPO-201ENST00000329563 SRIP30626 198 aa10.07□□□□□ -0.8
TSPO-201ENST00000329563 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
TSPO-201ENST00000329563 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms