RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 TRBV7-3A0A075B6L6 115 aa13.75□□□□□ -0.21
LRP3-201ENST00000253193 J3QQQ9 107 aa13.75□□□□□ -0.21
LRP3-201ENST00000253193 PRM2P04554 102 aa13.75□□□□□ -0.21
LRP3-201ENST00000253193 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
LRP3-201ENST00000253193 DGAT2L7PQ6IED9 249 aa13.75□□□□□ -0.21
LRP3-201ENST00000253193 COX6B1P14854 86 aa13.74□□□□□ -0.21
LRP3-201ENST00000253193 LINC01587Q99440 93 aa13.74□□□□□ -0.21
LRP3-201ENST00000253193 IGHV3-16A0A0C4DH30 117 aa13.74□□□□□ -0.21
LRP3-201ENST00000253193 CRYBG3Q68DQ2 2970 aa13.74□□□□□ -0.21
LRP3-201ENST00000253193 MORN3Q6PF18 240 aaPredicted RBP13.74□□□□□ -0.21
LRP3-201ENST00000253193 PTH2Q96A98 100 aa13.74□□□□□ -0.21
LRP3-201ENST00000253193 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 P0DMU3 169 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 FAM231AP0DMU4 169 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 FAM231CP0DMU5 169 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 MUC4Q99102 2169 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 PSMB8P28062 276 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 POLR2KP53803 58 aaKnown RBP13.73□□□□□ -0.21
LRP3-201ENST00000253193 A0A0J9YXV3 536 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 SLURP1P55000 103 aa13.73□□□□□ -0.21
LRP3-201ENST00000253193 TRBV7-9A0A0J9YWB2 115 aa13.72□□□□□ -0.21
LRP3-201ENST00000253193 NPC2P61916 151 aa13.72□□□□□ -0.21
LRP3-201ENST00000253193 I3L3M4 83 aa13.72□□□□□ -0.21
LRP3-201ENST00000253193 Q5PR19 223 aa13.72□□□□□ -0.21
LRP3-201ENST00000253193 PRO0461Q9UI25 63 aa13.72□□□□□ -0.21
LRP3-201ENST00000253193 PRB1P04280 392 aa13.71□□□□□ -0.21
LRP3-201ENST00000253193 CIDEAO60543 219 aa13.71□□□□□ -0.21
LRP3-201ENST00000253193 GATA3P23771 443 aa13.71□□□□□ -0.21
LRP3-201ENST00000253193 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
LRP3-201ENST00000253193 IGHV3-38A0A0C4DH36 116 aa13.71□□□□□ -0.22
LRP3-201ENST00000253193 A0A1W2PRX2 142 aa13.71□□□□□ -0.22
LRP3-201ENST00000253193 CRYGDP07320 174 aa13.71□□□□□ -0.22
LRP3-201ENST00000253193 CEMP1Q6PRD7 247 aaPredicted RBP13.71□□□□□ -0.22
LRP3-201ENST00000253193 TSHBP01222 138 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 IGIPA6NJ69 53 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 K7EQG2 157 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 LINC00315P59091 139 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 TIMM17AQ99595 171 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 KIF25-AS1Q9Y6Z4 181 aa13.7□□□□□ -0.22
LRP3-201ENST00000253193 M0QY20 66 aa13.69□□□□□ -0.22
LRP3-201ENST00000253193 PROK1P58294 105 aa13.69□□□□□ -0.22
LRP3-201ENST00000253193 DSCR9P59020 149 aa13.69□□□□□ -0.22
LRP3-201ENST00000253193 ZNRF2Q8NHG8 242 aa13.69□□□□□ -0.22
LRP3-201ENST00000253193 FAM19A4Q96LR4 140 aa13.69□□□□□ -0.22
LRP3-201ENST00000253193 EPG5Q9HCE0 2579 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 A0A0J9YY99 117 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 SMCPP49901 116 aaPredicted RBP13.68□□□□□ -0.22
LRP3-201ENST00000253193 ZANQ9Y493 2812 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 ITPR1Q14643 2758 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 IGLV4-69A0A075B6H9 119 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 GEMIN7Q9H840 131 aaKnown RBP13.68□□□□□ -0.22
LRP3-201ENST00000253193 VPREB3Q9UKI3 123 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 TSPAN13O95857 204 aa13.68□□□□□ -0.22
LRP3-201ENST00000253193 APRG1Q8IVJ8 170 aa13.67□□□□□ -0.22
LRP3-201ENST00000253193 NOTCH2Q04721 2471 aa13.67□□□□□ -0.22
LRP3-201ENST00000253193 PRRC2AP48634 2157 aaKnown RBP13.67□□□□□ -0.22
LRP3-201ENST00000253193 TRBV27A0A0K0K1C4 114 aa13.67□□□□□ -0.22
LRP3-201ENST00000253193 NFE4Q86UQ8 179 aa13.67□□□□□ -0.22
LRP3-201ENST00000253193 TSPEAR-AS2P59090 65 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 C18orf65Q6ZTR6 163 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 MTORP42345 2549 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 LGALS9O00182 355 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 PRO1854Q9UHT4 67 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 JMJD1CQ15652 2540 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 A0A0U1RRA0 63 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 UBE2E2Q96LR5 201 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 ERG28Q9UKR5 140 aa13.66□□□□□ -0.22
LRP3-201ENST00000253193 A4D1N5 150 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 C20orf203Q8NBC4 194 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 UTP20O75691 2785 aaKnown RBP13.65□□□□□ -0.22
LRP3-201ENST00000253193 ELANEP08246 267 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 CLUHP3Q96NS8 147 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 TIMM21Q9BVV7 248 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 SPATA25Q9BR10 227 aa13.65□□□□□ -0.22
LRP3-201ENST00000253193 RHOHQ15669 191 aa13.64□□□□□ -0.23
LRP3-201ENST00000253193 CUBNO60494 3623 aa13.64□□□□□ -0.23
LRP3-201ENST00000253193 A8MWV9 139 aa13.64□□□□□ -0.23
LRP3-201ENST00000253193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
LRP3-201ENST00000253193 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
LRP3-201ENST00000253193 C9orf85Q96MD7 179 aa13.64□□□□□ -0.23
LRP3-201ENST00000253193 FHL3Q13643 280 aa13.63□□□□□ -0.23
LRP3-201ENST00000253193 NXPH4O95158 308 aa13.63□□□□□ -0.23
LRP3-201ENST00000253193 IGHV3-53P01767 116 aa13.63□□□□□ -0.23
LRP3-201ENST00000253193 PEMTQ9UBM1 199 aa13.63□□□□□ -0.23
LRP3-201ENST00000253193 TRAV8-3A0A0A6YYJ7 113 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 C9JAW5 83 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 CFHR3Q02985 330 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 CKS1BP61024 79 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 FOXI1Q12951 378 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 MUSTN1Q8IVN3 82 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 TMEM61Q8N0U2 210 aa13.62□□□□□ -0.23
LRP3-201ENST00000253193 BRI3O95415 125 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 CFC1BP0CG36 223 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 CFC1P0CG37 223 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 ZNF415Q09FC8 603 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 SLC25A29Q8N8R3 303 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 ZNF580Q9UK33 172 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 IGSF10Q6WRI0 2623 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms