RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 PRYO14603 147 aa11.21□□□□□ -0.61
PMPCB-201ENST00000249269 UBE2D3P61077 147 aa11.21□□□□□ -0.61
PMPCB-201ENST00000249269 UBE2D2P62837 147 aa11.21□□□□□ -0.61
PMPCB-201ENST00000249269 TMEM141Q96I45 108 aa11.21□□□□□ -0.61
PMPCB-201ENST00000249269 S4R3C0 116 aa11.21□□□□□ -0.61
PMPCB-201ENST00000249269 PLCE1Q9P212 2302 aa11.21□□□□□ -0.62
PMPCB-201ENST00000249269 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
PMPCB-201ENST00000249269 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
PMPCB-201ENST00000249269 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
PMPCB-201ENST00000249269 COX6B1P14854 86 aa11.2□□□□□ -0.62
PMPCB-201ENST00000249269 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
PMPCB-201ENST00000249269 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 A0A087WW49 117 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 TRAV41A0A0B4J266 112 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 NXPH4O95158 308 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 FREM2Q5SZK8 3169 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 FAM223BA6NKX1 122 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
PMPCB-201ENST00000249269 FAM223AQ8IWN6 122 aa11.19□□□□□ -0.62
PMPCB-201ENST00000249269 ITLN2Q8WWU7 325 aaPredicted RBP11.19□□□□□ -0.62
PMPCB-201ENST00000249269 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 CXCL5P42830 114 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 CFHR3Q02985 330 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
PMPCB-201ENST00000249269 DAD1P61803 113 aa11.17□□□□□ -0.62
PMPCB-201ENST00000249269 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
PMPCB-201ENST00000249269 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
PMPCB-201ENST00000249269 TIMM17AQ99595 171 aa11.17□□□□□ -0.62
PMPCB-201ENST00000249269 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
PMPCB-201ENST00000249269 IGHV3-23P01764 117 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 ARFGEF3Q5TH69 2177 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 PRB3Q04118 309 aaPredicted RBP11.16□□□□□ -0.62
PMPCB-201ENST00000249269 ZNF56Q15929 161 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
PMPCB-201ENST00000249269 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
PMPCB-201ENST00000249269 FRYLO94915 3013 aa11.15□□□□□ -0.62
PMPCB-201ENST00000249269 H3BVH4 76 aa11.15□□□□□ -0.62
PMPCB-201ENST00000249269 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
PMPCB-201ENST00000249269 PHLDA3Q9Y5J5 127 aa11.14□□□□□ -0.63
PMPCB-201ENST00000249269 H3BUA1 57 aa11.14□□□□□ -0.63
PMPCB-201ENST00000249269 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
PMPCB-201ENST00000249269 CUL9Q8IWT3 2517 aa11.14□□□□□ -0.63
PMPCB-201ENST00000249269 M0R378 163 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
PMPCB-201ENST00000249269 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 NDUFA4O00483 81 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
PMPCB-201ENST00000249269 FRYQ5TBA9 3013 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 ZDBF2Q9HCK1 2354 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 A0A0J9YY99 117 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 PSMB2P49721 201 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
PMPCB-201ENST00000249269 SOCS3O14543 225 aa11.11□□□□□ -0.63
PMPCB-201ENST00000249269 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
PMPCB-201ENST00000249269 MDFIQ99750 246 aa11.11□□□□□ -0.63
PMPCB-201ENST00000249269 A0A0J9YX75 114 aa11.1□□□□□ -0.63
PMPCB-201ENST00000249269 TIMM17BO60830 172 aa11.1□□□□□ -0.63
PMPCB-201ENST00000249269 IGHV1-69P01742 117 aa11.1□□□□□ -0.63
PMPCB-201ENST00000249269 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
PMPCB-201ENST00000249269 POLR2KP53803 58 aaKnown RBP11.1□□□□□ -0.63
PMPCB-201ENST00000249269 SERP2Q8N6R1 65 aa11.1□□□□□ -0.63
PMPCB-201ENST00000249269 HIST1H4AP62805 103 aaKnown RBP11.1□□□□□ -0.63
PMPCB-201ENST00000249269 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 ZNF73O43830 326 aaPredicted RBP11.09□□□□□ -0.63
PMPCB-201ENST00000249269 IGHV3-30P01768 117 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 IGHV3-30-5P0DP03 117 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 GYPEP15421 78 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
PMPCB-201ENST00000249269 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 RHOHQ15669 191 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
PMPCB-201ENST00000249269 ICE1Q9Y2F5 2266 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
PMPCB-201ENST00000249269 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 PRR9Q5T870 116 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
PMPCB-201ENST00000249269 C5orf56Q8N8D9 126 aa11.08□□□□□ -0.64
PMPCB-201ENST00000249269 A8MUN3 132 aa11.07□□□□□ -0.64
PMPCB-201ENST00000249269 ZFP2Q6ZN57 461 aa11.07□□□□□ -0.64
PMPCB-201ENST00000249269 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.07□□□□□ -0.64
PMPCB-201ENST00000249269 TRIOBPQ9H2D6 2365 aa11.07□□□□□ -0.64
PMPCB-201ENST00000249269 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
PMPCB-201ENST00000249269 RPL39LQ96EH5 51 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms