RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 RPL27AP46776 148 aaKnown RBP6.3□□□□□ -1.4
SPARC-201ENST00000231061 CRIP2P52943 208 aaPredicted RBP6.3□□□□□ -1.4
SPARC-201ENST00000231061 PRR25Q96S07 402 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 CTSZQ9UBR2 303 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 COX7A1P24310 79 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 LYZP61626 148 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 PLGLAQ15195 96 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 URB1-AS1Q96HZ7 61 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 TRBV19A0A075B6N1 114 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 TRBV7-6A0A0J9YX20 115 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 IGLV2-23P01705 113 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 ZNF137PP52743 207 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
SPARC-201ENST00000231061 ABCA1O95477 2261 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 COL12A1Q99715 3063 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 RBMY1FQ15415 496 aaKnown RBP6.29□□□□□ -1.4
SPARC-201ENST00000231061 MGAQ8IWI9 3026 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 GHRHP01286 108 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 CD24P25063 80 aa6.29□□□□□ -1.4
SPARC-201ENST00000231061 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
SPARC-201ENST00000231061 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 CHD6Q8TD26 2715 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 ABCA12Q86UK0 2595 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 A0A087WZ39 114 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 LYNX1G3V0Z9 82 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 UBE2L6O14933 153 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 IGHV1-8P0DP01 117 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 LYNX1P0DP58 116 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 LST1O00453 97 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 CCKP06307 115 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 TRGV9Q99603 122 aa6.28□□□□□ -1.4
SPARC-201ENST00000231061 RPP21Q9H633 154 aaKnown RBP6.28□□□□□ -1.4
SPARC-201ENST00000231061 POLQO75417 2590 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 NDUFS5O43920 106 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 DCHS1Q96JQ0 3298 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 IGKV2D-26A0A0A0MRZ7 120 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 SCGB1D4Q6XE38 83 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 SPG11Q96JI7 2443 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 LAMA5O15230 3695 aa6.27□□□□□ -1.41
SPARC-201ENST00000231061 TRAV8-3A0A0A6YYJ7 113 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 HECTD1Q9ULT8 2610 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 F5H697 171 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 TMEM170BQ5T4T1 132 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 LINC00322Q6ZN03 302 aaPredicted RBP6.26□□□□□ -1.41
SPARC-201ENST00000231061 CHCHD1Q96BP2 118 aaKnown RBP6.26□□□□□ -1.41
SPARC-201ENST00000231061 E7EQL1 145 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 PRSS33Q8NF86 280 aa6.26□□□□□ -1.41
SPARC-201ENST00000231061 SMG1Q96Q15 3661 aaKnown RBP6.25□□□□□ -1.41
SPARC-201ENST00000231061 FSTL3O95633 263 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 IGHV1-3A0A0C4DH29 117 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 S4R3C0 116 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 MED13LQ71F56 2210 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 MALRD1Q5VYJ5 2156 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
SPARC-201ENST00000231061 RHOHQ15669 191 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 LINC00643Q86TS7 51 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 C7orf69Q9H7B7 122 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 ABCA4P78363 2273 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 IGHV4-39P01824 125 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPARC-201ENST00000231061 UBE2D3P61077 147 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 UBE2D2P62837 147 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 MRGPRG-AS1Q2M3A8 158 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 Q86TA4 180 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 Q8N2B8 174 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 TLN1Q9Y490 2541 aaKnown RBP6.24□□□□□ -1.41
SPARC-201ENST00000231061 COX7A2LO14548 114 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 MYOZ3Q8TDC0 251 aa6.24□□□□□ -1.41
SPARC-201ENST00000231061 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 BUB1B-PAK6H3BSN5 160 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 H7C2G1 150 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 KAAG1Q9UBP8 84 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 ADARB2-AS1A8MUL3 147 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 LINC01560Q8TB33 94 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 ZNF492Q9P255 531 aa6.23□□□□□ -1.41
SPARC-201ENST00000231061 ZNF292O60281 2723 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 J3QL48 77 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 ZNF491Q8N8L2 437 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 X6R8D5 127 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 ADGRG4Q8IZF6 3080 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 FAM223BA6NKX1 122 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 IGLV1-47P01700 117 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
SPARC-201ENST00000231061 LINC00313P59037 77 aa6.22□□□□□ -1.41
SPARC-201ENST00000231061 CENPEQ02224 2701 aa6.21□□□□□ -1.41
SPARC-201ENST00000231061 LY6HO94772 140 aa6.21□□□□□ -1.41
SPARC-201ENST00000231061 PIP4P2Q8N4L2 257 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms