RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PTPRBP23467 1997 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 NXPH4O95158 308 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 A0A096LPF7 62 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 GAGE7O76087 117 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 RASL10AQ92737 203 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 INSL3P51460 131 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 C15orf53Q8NAA6 179 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 SS18L2Q9UHA2 77 aa10.47□□□□□ -0.73
NFKB1-201ENST00000226574 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.73
NFKB1-201ENST00000226574 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.74
NFKB1-201ENST00000226574 FOXI1Q12951 378 aa10.46□□□□□ -0.74
NFKB1-201ENST00000226574 CDSNQ15517 529 aa10.46□□□□□ -0.74
NFKB1-201ENST00000226574 E9PLD3 99 aa10.46□□□□□ -0.74
NFKB1-201ENST00000226574 INSP01308 110 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 SLURP1P55000 103 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 CLPSL2Q6UWE3 100 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 GAGE6Q13070 117 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 ANKRD29Q8N6D5 301 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
NFKB1-201ENST00000226574 MALP21145 153 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 Q9H8V8 135 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
NFKB1-201ENST00000226574 PRM2P04554 102 aa10.44□□□□□ -0.74
NFKB1-201ENST00000226574 TRBV6-1A0A0K0K1D8 114 aa10.44□□□□□ -0.74
NFKB1-201ENST00000226574 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
NFKB1-201ENST00000226574 TOMM6Q96B49 74 aa10.44□□□□□ -0.74
NFKB1-201ENST00000226574 PRO3102Q9H379 93 aa10.44□□□□□ -0.74
NFKB1-201ENST00000226574 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 TNRC6BQ9UPQ9 1833 aaKnown RBP10.43□□□□□ -0.74
NFKB1-201ENST00000226574 RBMY1BA6NDE4 496 aaKnown RBP10.43□□□□□ -0.74
NFKB1-201ENST00000226574 RBMY1EA6NEQ0 496 aaKnown RBP10.43□□□□□ -0.74
NFKB1-201ENST00000226574 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 RBMY1DP0C7P1 496 aaKnown RBP10.43□□□□□ -0.74
NFKB1-201ENST00000226574 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
NFKB1-201ENST00000226574 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 PRR9Q5T870 116 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 C10orf99Q6UWK7 81 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 U3KQE9 123 aa10.43□□□□□ -0.74
NFKB1-201ENST00000226574 LEPROTO15243 131 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 LY6LH3BQJ8 138 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 ZNF48Q96MX3 618 aaPredicted RBP10.42□□□□□ -0.74
NFKB1-201ENST00000226574 A0A096LNJ9 63 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 TCL1BO95988 128 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 MT-ATP8P03928 68 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
NFKB1-201ENST00000226574 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
NFKB1-201ENST00000226574 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
NFKB1-201ENST00000226574 LMO4P61968 165 aa10.41□□□□□ -0.74
NFKB1-201ENST00000226574 TMEM86BQ8N661 226 aa10.4□□□□□ -0.74
NFKB1-201ENST00000226574 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.74
NFKB1-201ENST00000226574 ODF3BA8MYP8 253 aa10.4□□□□□ -0.75
NFKB1-201ENST00000226574 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.75
NFKB1-201ENST00000226574 TM2D2Q9BX73 214 aa10.4□□□□□ -0.75
NFKB1-201ENST00000226574 A8MZ25 164 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 FSTL3O95633 263 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 IFITM1P13164 125 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 S100A7L2Q5SY68 101 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 A0A087WW49 117 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 Q6ZS46 218 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
NFKB1-201ENST00000226574 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
NFKB1-201ENST00000226574 HHLA3Q9XRX5 114 aa10.38□□□□□ -0.75
NFKB1-201ENST00000226574 ADAMTS20P59510 1910 aa10.38□□□□□ -0.75
NFKB1-201ENST00000226574 REV3LO60673 3130 aa10.38□□□□□ -0.75
NFKB1-201ENST00000226574 RHODO00212 210 aa10.38□□□□□ -0.75
NFKB1-201ENST00000226574 PROK1P58294 105 aa10.38□□□□□ -0.75
NFKB1-201ENST00000226574 C19orf84I3L1E1 186 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 CRYBA4P53673 196 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 LINC01619G3V211 115 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 NRACQ8N912 160 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 PRB1P04280 392 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 LAMTOR3Q9UHA4 124 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 U3KQK5 164 aa10.37□□□□□ -0.75
NFKB1-201ENST00000226574 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
NFKB1-201ENST00000226574 RHOHQ15669 191 aa10.36□□□□□ -0.75
NFKB1-201ENST00000226574 USP24Q9UPU5 2620 aa10.36□□□□□ -0.75
NFKB1-201ENST00000226574 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 IGF2-ASQ6U949 168 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 SMIM20Q8N5G0 67 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 C20orf203Q8NBC4 194 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 COL5A1P20908 1838 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-201ENST00000226574 EDN2P20800 178 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 NBL1P41271 181 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms