RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PLEKHB2Q96CS7 222 aa16.12■□□□□ 0.17
SMARCD2-201ENST00000225742 DUX3Q96PT4 197 aa16.12■□□□□ 0.17
SMARCD2-201ENST00000225742 RBMY1BA6NDE4 496 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 RBMY1EA6NEQ0 496 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 RBMY1DP0C7P1 496 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 PCP4P48539 62 aa16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 SRSF9Q13242 221 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 CLUHP3Q96NS8 147 aa16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 PYGO1Q9Y3Y4 419 aa16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 ZFHX3Q15911 3703 aa16.11■□□□□ 0.17
SMARCD2-201ENST00000225742 CRYBA4P53673 196 aa16.1■□□□□ 0.17
SMARCD2-201ENST00000225742 RAX2Q96IS3 184 aa16.1■□□□□ 0.17
SMARCD2-201ENST00000225742 MAP6D1Q9H9H5 199 aa16.1■□□□□ 0.17
SMARCD2-201ENST00000225742 A0A0J9YY99 117 aa16.1■□□□□ 0.17
SMARCD2-201ENST00000225742 KLHL30-AS1Q8NEE0 82 aa16.1■□□□□ 0.17
SMARCD2-201ENST00000225742 F8W1H4 67 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 G3V4G9 280 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 EMP1P54849 157 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 DEFB114Q30KQ6 69 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 KRTAP1-3Q8IUG1 177 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 CELSR1Q9NYQ6 3014 aa16.09■□□□□ 0.17
SMARCD2-201ENST00000225742 COL12A1Q99715 3063 aa16.08■□□□□ 0.17
SMARCD2-201ENST00000225742 UBE2D1P51668 147 aa16.08■□□□□ 0.17
SMARCD2-201ENST00000225742 DEFB104AQ8WTQ1 72 aa16.08■□□□□ 0.17
SMARCD2-201ENST00000225742 DLX4Q92988 240 aaPredicted RBP16.08■□□□□ 0.17
SMARCD2-201ENST00000225742 SPXQ9BT56 116 aa16.08■□□□□ 0.17
SMARCD2-201ENST00000225742 ACACBO00763 2458 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 VPS13CQ709C8 3753 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 TRAV25A0A0B4J276 109 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 LEPROTO15243 131 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 SAP30O75446 220 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 VCX2Q9H322 139 aa16.08■□□□□ 0.16
SMARCD2-201ENST00000225742 TMEM223A0PJW6 202 aa16.07■□□□□ 0.16
SMARCD2-201ENST00000225742 J3QQQ9 107 aa16.07■□□□□ 0.16
SMARCD2-201ENST00000225742 RHODO00212 210 aa16.07■□□□□ 0.16
SMARCD2-201ENST00000225742 TNFRSF18Q9Y5U5 241 aa16.07■□□□□ 0.16
SMARCD2-201ENST00000225742 IGLV4-3A0A075B6K6 122 aa16.06■□□□□ 0.16
SMARCD2-201ENST00000225742 LGALS3P17931 250 aaKnown RBP16.06■□□□□ 0.16
SMARCD2-201ENST00000225742 KHDC1LQ5JSQ8 128 aa16.06■□□□□ 0.16
SMARCD2-201ENST00000225742 SLC25A29Q8N8R3 303 aa16.06■□□□□ 0.16
SMARCD2-201ENST00000225742 DOPEY2Q9Y3R5 2298 aa16.06■□□□□ 0.16
SMARCD2-201ENST00000225742 INSP01308 110 aa16.05■□□□□ 0.16
SMARCD2-201ENST00000225742 DNAJC30Q96LL9 226 aa16.05■□□□□ 0.16
SMARCD2-201ENST00000225742 MYO18BQ8IUG5 2567 aa16.05■□□□□ 0.16
SMARCD2-201ENST00000225742 HTN1P15515 57 aa16.04■□□□□ 0.16
SMARCD2-201ENST00000225742 TSPEAR-AS2P59090 65 aa16.04■□□□□ 0.16
SMARCD2-201ENST00000225742 BEAN1Q3B7T3 259 aa16.04■□□□□ 0.16
SMARCD2-201ENST00000225742 Q6ZSV7 163 aa16.04■□□□□ 0.16
SMARCD2-201ENST00000225742 AMELXQ99217 191 aa16.04■□□□□ 0.16
SMARCD2-201ENST00000225742 LINC01587Q99440 93 aa16.03■□□□□ 0.16
SMARCD2-201ENST00000225742 OPRPNQ99935 248 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-201ENST00000225742 ZNF22P17026 224 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-201ENST00000225742 C11orf72Q8NBR9 251 aa16.03■□□□□ 0.16
SMARCD2-201ENST00000225742 USP9YO00507 2555 aaPredicted RBP16.02■□□□□ 0.16
SMARCD2-201ENST00000225742 CFAP126Q5VTH2 177 aa16.02■□□□□ 0.16
SMARCD2-201ENST00000225742 PGPEP1Q9NXJ5 209 aa16.02■□□□□ 0.16
SMARCD2-201ENST00000225742 IGHV3-30P01768 117 aa16.01■□□□□ 0.15
SMARCD2-201ENST00000225742 IGHV3-30-5P0DP03 117 aa16.01■□□□□ 0.15
SMARCD2-201ENST00000225742 MRPL16Q9NX20 251 aaKnown RBP16.01■□□□□ 0.15
SMARCD2-201ENST00000225742 LYRM7Q5U5X0 104 aa16.01■□□□□ 0.15
SMARCD2-201ENST00000225742 SPANXA1Q9NS26 97 aa16.01■□□□□ 0.15
SMARCD2-201ENST00000225742 IGHV3-73A0A0B4J1V6 119 aa16■□□□□ 0.15
SMARCD2-201ENST00000225742 RS1O15537 224 aa16■□□□□ 0.15
SMARCD2-201ENST00000225742 IGHV3-53P01767 116 aa16■□□□□ 0.15
SMARCD2-201ENST00000225742 CD28P10747 220 aa16■□□□□ 0.15
SMARCD2-201ENST00000225742 GAGE13Q4V321 117 aa15.99■□□□□ 0.15
SMARCD2-201ENST00000225742 CELSR2Q9HCU4 2923 aa15.99■□□□□ 0.15
SMARCD2-201ENST00000225742 A0A0J9YXV3 536 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 DNAJC9-AS1A6NH13 148 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 PROK1P58294 105 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 FHL3Q13643 280 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 UBR5O95071 2799 aaPredicted RBP15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 ZNF462Q96JM2 2506 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 MRPS36P82909 103 aaKnown RBP15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 RPL24P83731 157 aaKnown RBP15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 NDUFA11Q86Y39 141 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 USP24Q9UPU5 2620 aa15.98■□□□□ 0.15
SMARCD2-201ENST00000225742 FAM208BQ5VWN6 2430 aa15.97■□□□□ 0.15
SMARCD2-201ENST00000225742 H3BMG7 143 aa15.97■□□□□ 0.15
SMARCD2-201ENST00000225742 SORL1Q92673 2214 aa15.97■□□□□ 0.15
SMARCD2-201ENST00000225742 FBN2P35556 2912 aa15.96■□□□□ 0.15
SMARCD2-201ENST00000225742 UTP20O75691 2785 aaKnown RBP15.96■□□□□ 0.15
SMARCD2-201ENST00000225742 TSPAN13O95857 204 aa15.96■□□□□ 0.14
SMARCD2-201ENST00000225742 CHCHD7Q9BUK0 85 aa15.96■□□□□ 0.14
SMARCD2-201ENST00000225742 PRO0461Q9UI25 63 aa15.96■□□□□ 0.14
SMARCD2-201ENST00000225742 CMC4P56277 68 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-201ENST00000225742 Q6ZSN1 163 aa15.95■□□□□ 0.14
SMARCD2-201ENST00000225742 FAM104AQ969W3 186 aa15.95■□□□□ 0.14
SMARCD2-201ENST00000225742 TEX48A0A1B0GUV7 120 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 J3QR89 54 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 UBE2D3P61077 147 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 UBE2D2P62837 147 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 WFDC2Q14508 124 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 ODF3L2Q3SX64 289 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 NACAE9PAV3 2078 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 STHQ8IWL8 128 aa15.94■□□□□ 0.14
SMARCD2-201ENST00000225742 TINCRA0A1B0GVN0 87 aa15.93■□□□□ 0.14
SMARCD2-201ENST00000225742 TMEM238C9JI98 176 aa15.93■□□□□ 0.14
SMARCD2-201ENST00000225742 APOMO95445 188 aa15.93■□□□□ 0.14
SMARCD2-201ENST00000225742 PRM2P04554 102 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms