RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 C14orf132Q9NPU4 83 aa13.56□□□□□ -0.24
EXTL3-201ENST00000220562 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
EXTL3-201ENST00000220562 PKDREJQ9NTG1 2253 aa13.56□□□□□ -0.24
EXTL3-201ENST00000220562 LOXL1Q08397 574 aaPredicted RBP13.55□□□□□ -0.24
EXTL3-201ENST00000220562 HIGD2BQ4VC39 106 aa13.55□□□□□ -0.24
EXTL3-201ENST00000220562 KLK5Q9Y337 293 aaPredicted RBP13.55□□□□□ -0.24
EXTL3-201ENST00000220562 PRO0255Q9UI72 69 aa13.55□□□□□ -0.24
EXTL3-201ENST00000220562 ODF3BA8MYP8 253 aa13.55□□□□□ -0.24
EXTL3-201ENST00000220562 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
EXTL3-201ENST00000220562 TMEM256-PLSCR3K7ERE1 68 aa13.54□□□□□ -0.24
EXTL3-201ENST00000220562 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
EXTL3-201ENST00000220562 SPTBN1Q01082 2364 aaKnown RBP13.53□□□□□ -0.24
EXTL3-201ENST00000220562 COX7BP24311 80 aa13.52□□□□□ -0.24
EXTL3-201ENST00000220562 MIAQ16674 131 aa13.52□□□□□ -0.24
EXTL3-201ENST00000220562 LINC00322Q6ZN03 302 aaPredicted RBP13.52□□□□□ -0.24
EXTL3-201ENST00000220562 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.24
EXTL3-201ENST00000220562 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.24
EXTL3-201ENST00000220562 C4orf48Q5BLP8 95 aa13.52□□□□□ -0.25
EXTL3-201ENST00000220562 CRYGBP07316 175 aa13.51□□□□□ -0.25
EXTL3-201ENST00000220562 P0C879 139 aa13.51□□□□□ -0.25
EXTL3-201ENST00000220562 RNASE8Q8TDE3 154 aaKnown RBP13.51□□□□□ -0.25
EXTL3-201ENST00000220562 CADP27708 2225 aa13.51□□□□□ -0.25
EXTL3-201ENST00000220562 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
EXTL3-201ENST00000220562 INSL3P51460 131 aa13.51□□□□□ -0.25
EXTL3-201ENST00000220562 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 H0Y9J4 135 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 Q6ZTI0 123 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 H3BT86 120 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 IGLV2-8P01709 118 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 DENND4AQ7Z401 1863 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 ZNF106Q9H2Y7 1883 aaKnown RBP13.5□□□□□ -0.25
EXTL3-201ENST00000220562 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 C2orf16Q68DN1 1984 aa13.5□□□□□ -0.25
EXTL3-201ENST00000220562 C19orf84I3L1E1 186 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 PTH2Q96A98 100 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 ACACAQ13085 2346 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 TCL1BO95988 128 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 IGKV2D-26A0A0A0MRZ7 120 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 C1orf229Q6ZS94 237 aaPredicted RBP13.49□□□□□ -0.25
EXTL3-201ENST00000220562 B9D2Q9BPU9 175 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 ROS1P08922 2347 aa13.49□□□□□ -0.25
EXTL3-201ENST00000220562 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 C11orf45Q8TAV5 145 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 G3V4G9 280 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 LMO4P61968 165 aa13.48□□□□□ -0.25
EXTL3-201ENST00000220562 NCOR1O75376 2440 aa13.47□□□□□ -0.25
EXTL3-201ENST00000220562 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
EXTL3-201ENST00000220562 REG3AQ06141 175 aa13.47□□□□□ -0.25
EXTL3-201ENST00000220562 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
EXTL3-201ENST00000220562 IGKV2-24A0A0C4DH68 120 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 Q6YL49 198 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 LINC00467Q9BRT7 94 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 SMIM20Q8N5G0 67 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 Q6ZPA2 131 aa13.46□□□□□ -0.25
EXTL3-201ENST00000220562 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
EXTL3-201ENST00000220562 LINC00574Q9H8X3 128 aa13.45□□□□□ -0.26
EXTL3-201ENST00000220562 SPATA12Q7Z6I5 190 aa13.45□□□□□ -0.26
EXTL3-201ENST00000220562 GTF3C1Q12789 2109 aa13.45□□□□□ -0.26
EXTL3-201ENST00000220562 PRORYQ9H606 182 aa13.45□□□□□ -0.26
EXTL3-201ENST00000220562 IGF1P05019 195 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 RNF183Q96D59 192 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 WNK2Q9Y3S1 2297 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 MALRD1Q5VYJ5 2156 aa13.44□□□□□ -0.26
EXTL3-201ENST00000220562 DYSFO75923 2080 aa13.43□□□□□ -0.26
EXTL3-201ENST00000220562 J3KT08 172 aa13.43□□□□□ -0.26
EXTL3-201ENST00000220562 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
EXTL3-201ENST00000220562 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
EXTL3-201ENST00000220562 NDUFC2O95298 119 aa13.43□□□□□ -0.26
EXTL3-201ENST00000220562 NEXN-AS1Q8NBZ9 246 aa13.42□□□□□ -0.26
EXTL3-201ENST00000220562 CHCHD10Q8WYQ3 142 aaPredicted RBP13.42□□□□□ -0.26
EXTL3-201ENST00000220562 UFSP1Q6NVU6 142 aa13.42□□□□□ -0.26
EXTL3-201ENST00000220562 UPK3BQ9BT76 320 aa13.42□□□□□ -0.26
EXTL3-201ENST00000220562 HIST2H2BDQ6DRA6 164 aa13.42□□□□□ -0.26
EXTL3-201ENST00000220562 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
EXTL3-201ENST00000220562 LRRC75A-AS1Q8N1F1 130 aa13.41□□□□□ -0.26
EXTL3-201ENST00000220562 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
EXTL3-201ENST00000220562 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
EXTL3-201ENST00000220562 K7EQG2 157 aa13.4□□□□□ -0.26
EXTL3-201ENST00000220562 EIF4EBP1Q13541 118 aaPredicted RBP13.4□□□□□ -0.26
EXTL3-201ENST00000220562 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
EXTL3-201ENST00000220562 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
EXTL3-201ENST00000220562 C22orf34Q6ZV56 151 aa13.4□□□□□ -0.26
EXTL3-201ENST00000220562 CRYGDP07320 174 aa13.4□□□□□ -0.26
EXTL3-201ENST00000220562 TRAV23DV6A0A075B6W5 121 aa13.39□□□□□ -0.27
EXTL3-201ENST00000220562 PDE6GP18545 87 aa13.39□□□□□ -0.27
EXTL3-201ENST00000220562 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
EXTL3-201ENST00000220562 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms