RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TMEM131Q92545 1883 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 TNCP24821 2201 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 SLPIP03973 132 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 PRM2P04554 102 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 C9orf66Q5T8R8 295 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 ODF1Q14990 250 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 LINC01620Q4KN68 170 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
TGFBR3-201ENST00000212355 C19orf84I3L1E1 186 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 PROK1P58294 105 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 C8orf31Q8N9H6 132 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 LYPD6Q86Y78 171 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 IGKV2-24A0A0C4DH68 120 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 FAM110AQ9BQ89 295 aa10.37□□□□□ -0.75
TGFBR3-201ENST00000212355 ZFHX2Q9C0A1 2572 aaPredicted RBP10.36□□□□□ -0.75
TGFBR3-201ENST00000212355 SPART-AS1P0CW21 52 aa10.36□□□□□ -0.75
TGFBR3-201ENST00000212355 HERV-K104P63124 156 aa10.36□□□□□ -0.75
TGFBR3-201ENST00000212355 SPATA12Q7Z6I5 190 aa10.36□□□□□ -0.75
TGFBR3-201ENST00000212355 UBE2AP49459 152 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 TCL1BO95988 128 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 FANCD2OSQ96PS1 177 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 FOXI1Q12951 378 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 PSMB8P28062 276 aa10.35□□□□□ -0.75
TGFBR3-201ENST00000212355 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 IGFL2Q6UWQ7 119 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 A8MZ25 164 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 Q6ZTI0 123 aa10.34□□□□□ -0.75
TGFBR3-201ENST00000212355 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 NREPQ16612 68 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 CCL18P55774 89 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 MED12LQ86YW9 2145 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 CRYGBP07316 175 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
TGFBR3-201ENST00000212355 IGLV1-47P01700 117 aa10.32□□□□□ -0.76
TGFBR3-201ENST00000212355 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
TGFBR3-201ENST00000212355 E9PLD3 99 aa10.32□□□□□ -0.76
TGFBR3-201ENST00000212355 Q8NA96 180 aa10.32□□□□□ -0.76
TGFBR3-201ENST00000212355 MAP6D1Q9H9H5 199 aa10.32□□□□□ -0.76
TGFBR3-201ENST00000212355 H0Y9J4 135 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 ACYP1P07311 99 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 IGLV2-8P01709 118 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 TEX49A0A1B0GTD5 131 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 DNAJC9-AS1A6NH13 148 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 CTRLP40313 264 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
TGFBR3-201ENST00000212355 RNF138Q8WVD3 245 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 C11orf1Q9H5F2 150 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 ZNF295-AS1Q8N0V1 137 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 G3V4G9 280 aa10.3□□□□□ -0.76
TGFBR3-201ENST00000212355 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
TGFBR3-201ENST00000212355 MPLKIPQ8TAP9 179 aa10.29□□□□□ -0.76
TGFBR3-201ENST00000212355 NDUFA1O15239 70 aa10.29□□□□□ -0.76
TGFBR3-201ENST00000212355 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
TGFBR3-201ENST00000212355 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
TGFBR3-201ENST00000212355 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
TGFBR3-201ENST00000212355 MT-ATP8P03928 68 aa10.28□□□□□ -0.76
TGFBR3-201ENST00000212355 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
TGFBR3-201ENST00000212355 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
TGFBR3-201ENST00000212355 A0A0J9YX75 114 aa10.27□□□□□ -0.76
TGFBR3-201ENST00000212355 TMEM258P61165 79 aa10.27□□□□□ -0.76
TGFBR3-201ENST00000212355 CRIP3Q6Q6R5 217 aa10.27□□□□□ -0.76
TGFBR3-201ENST00000212355 Q6ZSR3 168 aa10.27□□□□□ -0.76
TGFBR3-201ENST00000212355 TRBV10-2A0A0K0K1G8 114 aa10.27□□□□□ -0.77
TGFBR3-201ENST00000212355 MLST8Q9BVC4 326 aa10.27□□□□□ -0.77
TGFBR3-201ENST00000212355 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
TGFBR3-201ENST00000212355 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
TGFBR3-201ENST00000212355 CRIP1P50238 77 aa10.26□□□□□ -0.77
TGFBR3-201ENST00000212355 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
TGFBR3-201ENST00000212355 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
TGFBR3-201ENST00000212355 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
TGFBR3-201ENST00000212355 DIRC1Q969H9 104 aa10.26□□□□□ -0.77
TGFBR3-201ENST00000212355 A6NDX4 124 aa10.25□□□□□ -0.77
TGFBR3-201ENST00000212355 SMAD5-AS1Q9Y6J3 95 aa10.25□□□□□ -0.77
TGFBR3-201ENST00000212355 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
TGFBR3-201ENST00000212355 C20orf203Q8NBC4 194 aa10.25□□□□□ -0.77
TGFBR3-201ENST00000212355 GPHB5Q86YW7 130 aa10.24□□□□□ -0.77
TGFBR3-201ENST00000212355 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms