RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 Q6YL49 198 aa9.77□□□□□ -0.85
CTNS-201ENST00000046640 C11orf44Q8N8P7 122 aa9.77□□□□□ -0.85
CTNS-201ENST00000046640 KLLNB2CW77 178 aa9.77□□□□□ -0.85
CTNS-201ENST00000046640 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
CTNS-201ENST00000046640 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.85
CTNS-201ENST00000046640 ZNF256Q9Y2P7 627 aaPredicted RBP9.77□□□□□ -0.85
CTNS-201ENST00000046640 CR1P17927 2039 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 NIPBLQ6KC79 2804 aaeCLIP9.76□□□□□ -0.85
CTNS-201ENST00000046640 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 CKS1BP61024 79 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 SNRPD3P62318 126 aaKnown RBP9.76□□□□□ -0.85
CTNS-201ENST00000046640 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 PTH2Q96A98 100 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 SPATA25Q9BR10 227 aa9.76□□□□□ -0.85
CTNS-201ENST00000046640 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
CTNS-201ENST00000046640 J3QLI3 93 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 TAL2Q16559 108 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 TENM4Q6N022 2769 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 TCTEX1D4Q5JR98 221 aa9.75□□□□□ -0.85
CTNS-201ENST00000046640 A0A0J9YX75 114 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 CRYGDP07320 174 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 Q8N1Y9 231 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 K7EQG2 157 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 APRG1Q8IVJ8 170 aa9.74□□□□□ -0.85
CTNS-201ENST00000046640 TSHBP01222 138 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 H7C2G1 150 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 SUMO4Q6EEV6 95 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 TRAV26-1A0A087WT03 109 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 LINC00315P59091 139 aa9.73□□□□□ -0.85
CTNS-201ENST00000046640 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
CTNS-201ENST00000046640 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
CTNS-201ENST00000046640 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
CTNS-201ENST00000046640 KIF25-AS1Q9Y6Z4 181 aa9.72□□□□□ -0.85
CTNS-201ENST00000046640 TSPAN13O95857 204 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 ELANEP08246 267 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 DEFB131AP59861 70 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 ZNF56Q15929 161 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 WFDC11Q8NEX6 87 aa9.71□□□□□ -0.85
CTNS-201ENST00000046640 A0A1W2PRX2 142 aa9.71□□□□□ -0.86
CTNS-201ENST00000046640 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.86
CTNS-201ENST00000046640 ITPR2Q14571 2701 aa9.71□□□□□ -0.86
CTNS-201ENST00000046640 IGLV4-69A0A075B6H9 119 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 FSHBP01225 129 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
CTNS-201ENST00000046640 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
CTNS-201ENST00000046640 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 CRYBA4P53673 196 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 RBMY1A1P0DJD3 496 aaKnown RBP9.69□□□□□ -0.86
CTNS-201ENST00000046640 RBMY1CP0DJD4 496 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 RBMY1FQ15415 496 aaKnown RBP9.69□□□□□ -0.86
CTNS-201ENST00000046640 ZNF876PQ49A33 203 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 DLX4Q92988 240 aaPredicted RBP9.69□□□□□ -0.86
CTNS-201ENST00000046640 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 A6NJY4 79 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 MED14OSP0DP75 135 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 PMVKQ15126 192 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
CTNS-201ENST00000046640 HERVK_113P61574 105 aa9.68□□□□□ -0.86
CTNS-201ENST00000046640 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
CTNS-201ENST00000046640 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
CTNS-201ENST00000046640 A0A0J9YY99 117 aa9.68□□□□□ -0.86
CTNS-201ENST00000046640 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 TMEM89A2RUT3 159 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 VCYO14598 125 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 PROK1P58294 105 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 FOXI1Q12951 378 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 KRTAP1-3Q8IUG1 177 aa9.67□□□□□ -0.86
CTNS-201ENST00000046640 HELZ2Q9BYK8 2649 aaKnown RBP9.67□□□□□ -0.86
CTNS-201ENST00000046640 LGALS9O00182 355 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 NXPH4O95158 308 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 TCL1BO95988 128 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
CTNS-201ENST00000046640 NDUFA11Q86Y39 141 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 TRAV2A0A0B4J234 112 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 P0DMU3 169 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
CTNS-201ENST00000046640 CFAP126Q5VTH2 177 aa9.66□□□□□ -0.86
CTNS-201ENST00000046640 LINC01619G3V211 115 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 CFC1BP0CG36 223 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 CFC1P0CG37 223 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms