RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Igkv4-59A0A0B4J1I8 117 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 P04212 136 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 MlanaQ2TA50 113 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Rbm38Q62176 237 aaKnown RBP10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Sh3bgrl3Q91VW3 93 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Rpl34Q9D1R9 117 aaKnown RBP10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Topaz1E5FYH1 1653 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Sc5dO88822 299 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Trav7-2Q5R1I3 112 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Srsf1Q6PDM2 248 aaKnown RBP10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 SpinklQ8CEK3 90 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 MavsQ8VCF0 503 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Gm20458E9PXJ7 78 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Zfp2P08043 459 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Crim1Q9JLL0 1037 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 P01664 111 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Cxcl1P12850 96 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Nr2c2apQ3TV70 140 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Neurl3Q8CJC5 254 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Tdrd6P61407 2134 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Xcl1P47993 114 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Tmem241Q3UME2 297 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Znf503Q7TMA2 652 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Gpx2Q9JHC0 190 aa10.65□□□□□ -0.7
Ncan-201ENSMUST00000002412 Ear14F6YUX7 155 aa10.65□□□□□ -0.71
Ncan-201ENSMUST00000002412 Rpl23P62830 140 aaKnown RBP10.65□□□□□ -0.71
Ncan-201ENSMUST00000002412 Wfdc9Q3UW41 83 aa10.65□□□□□ -0.71
Ncan-201ENSMUST00000002412 Olfr1373Q7TQT6 311 aa10.65□□□□□ -0.71
Ncan-201ENSMUST00000002412 Smim19Q80ZU4 107 aa10.65□□□□□ -0.71
Ncan-201ENSMUST00000002412 Plin4O88492 1403 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Plppr1Q8BFZ2 325 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Lhx9Q9WUH2 397 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 CckP09240 115 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 P18524 117 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Il17bQ9QXT6 180 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Trav21-dv12A0A075B6C4 109 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Klk1b4P00757 256 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Prima1Q810F0 153 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Ankrd31A0A140LI88 1765 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 E130218I03RikA0A0U1RNU5 63 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 H60bB1B212 251 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Prr19B2RW88 366 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Anapc10Q8K2H6 185 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Wnk2Q3UH66 2149 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Trav6n-5A0A075B621 112 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Sec11aQ9R0P6 179 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Slurp1Q9Z0K7 110 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Ndufa7Q9Z1P6 113 aaKnown RBP10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Abca15E9PWH4 1668 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Scn1aA2APX8 2009 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 P01665 111 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 P01666 111 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Q0VG49 157 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Cox7a2lQ61387 111 aa10.64□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv4-54A0A0G2JES9 117 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv4-61A0A0G2JH00 117 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Prr3Q811B5 190 aaKnown RBP10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Sf3b5Q923D4 86 aaKnown RBP10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Ss18l2Q9D174 77 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv6-23A0A140T8N5 115 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 4931422A03RikA2BHN9 113 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Rasl10bQ5SSG5 203 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Dll3O88516 592 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bmP10854 126 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bhQ64478 126 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist2h2bbQ64525 126 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv5-39A0A0G2JDV4 115 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv7-33P01632 114 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Lrcol1Q3URS3 161 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 TdhQ8K3F7 373 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Shisa9Q9CZN4 424 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Icam4Q9ERM2 262 aa10.63□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hoxd3P09027 433 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 RflnaQ7TS73 204 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 B430218F22RikQ8BQR5 223 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Tjp1P39447 1745 aaKnown RBP10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Olfr491Q8VG06 310 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Srp19Q9D7A6 144 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 E430018J23RikE9PZQ8 461 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 PlnP61014 52 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 4930596D02RikQ3V0H9 216 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Gm6040Q4QY32 63 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Rpl32-psP17932 135 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Cox5bP19536 128 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Bricd5Q8BV89 174 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Igkv4-63A0A0G2JFU6 117 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bfP10853 126 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Cnr2P47936 347 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bbQ64475 126 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bkQ8CGP1 126 aaKnown RBP10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Hist1h2bpQ8CGP2 126 aaKnown RBP10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Nkx2-8O70584 235 aa10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Rbm3O89086 153 aaKnown RBP10.62□□□□□ -0.71
Ncan-201ENSMUST00000002412 Tmem100Q9CQG9 134 aa10.61□□□□□ -0.71
Ncan-201ENSMUST00000002412 Prss30Q9QYZ9 310 aa10.61□□□□□ -0.71
Ncan-201ENSMUST00000002412 Prss46Q5M8S2 314 aa10.61□□□□□ -0.71
Ncan-201ENSMUST00000002412 Znrf1Q91V17 227 aa10.61□□□□□ -0.71
Ncan-201ENSMUST00000002412 TicrrQ8BQ33 1889 aa10.61□□□□□ -0.71
Ncan-201ENSMUST00000002412 Gm9857F7CXR1 130 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 143.4 ms