RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 PP6455Q8WZ26 134 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TMEM203Q969S6 136 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RERGLQ9H628 205 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SAR1AQ9NR31 198 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 COA4Q9NYJ1 87 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PSME4Q14997 1843 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 USP9XQ93008 2570 aaPredicted RBP0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ABCC10Q5T3U5 1492 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ANKRD17O75179 2603 aaKnown RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRGV2A0A075B6R0 118 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IGHV1-24A0A0C4DH33 117 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 A0A0G2JMM0 328 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C3orf85A0A1B0GTC6 90 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 A0A1W2PPB8 328 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 KIR3DP1A8MWS1 328 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 JMJD7-PLA2G4BH0Y9G9 81 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 J3QLW9 94 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CORTO00230 105 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CCL25O15444 150 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TNFP01375 233 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CKS2P33552 79 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LSM3P62310 102 aaKnown RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CIRBPQ14011 172 aaKnown RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 OR2T2Q6IF00 324 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LINC00322Q6ZN03 302 aaPredicted RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NDUFA11Q86Y39 141 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SNX29P2Q8IUI4 249 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 DYNLRB2Q8TF09 96 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 OBSCN-AS1Q96MR7 158 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 AMELYQ99218 206 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 AGPAT4-IT1Q9H0P7 198 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CDC42SE1Q9NRR8 79 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RPRMQ9NS64 109 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SCN3BQ9NY72 215 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TAS2R8Q9NYW2 309 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MRPL35Q9NZE8 188 aaKnown RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NUP188Q5SRE5 1749 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MON2Q7Z3U7 1717 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IFT172Q9UG01 1749 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SPAG17Q6Q759 2223 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SNRNP200O75643 2136 aaKnown RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 HECTD1Q9ULT8 2610 aa0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NCOA6Q14686 2063 aaPredicted RBP0.49□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 JMJD1CQ15652 2540 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NAV2Q8IVL1 2488 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CPSF1Q10570 1443 aaKnown RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NAIPQ13075 1403 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ASCC3Q8N3C0 2202 aaKnown RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PPLO60437 1756 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SETD2Q9BYW2 2564 aaPredicted RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 A0A087WTM6 91 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRBV10-1A0A0K0K1A3 114 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RBP4P02753 201 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SMIM6P0DI80 62 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ZNF25P17030 456 aaPredicted RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 S100A1P23297 94 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 S100PP25815 95 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NEDD8Q15843 81 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MEIG1Q5JSS6 88 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TEX261Q6UWH6 196 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PLPP5Q8NEB5 264 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LINC00526Q96FQ7 95 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 DMAC1Q96GE9 116 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C12orf57Q99622 126 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PSMG3Q9BT73 122 aaPredicted RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NDUFA12Q9UI09 145 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 KLK9Q9UKQ9 250 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NOP16Q9Y3C1 178 aaKnown RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IER3IP1Q9Y5U9 82 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SERP1Q9Y6X1 66 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 DOPEY1Q5JWR5 2465 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TOP2BQ02880 1626 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PRKDCP78527 4128 aaKnown RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 GAPVD1Q14C86 1478 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MAGI1Q96QZ7 1491 aaPredicted RBP0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CHD8Q9HCK8 2581 aa0.48□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ANKHD1Q8IWZ3 2542 aaKnown RBP0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C10orf71Q711Q0 1435 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 VWFP04275 2813 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MARF1Q9Y4F3 1742 aaKnown RBP0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ASH1LQ9NR48 2969 aaKnown RBP0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 EPG5Q9HCE0 2579 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IGKV3D-7A0A0C4DH55 119 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IGKV3OR2-268A0A0C4DH90 116 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 A0A1W2PRS3 328 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FAM25AB3EWG3 89 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FAM25CB3EWG5 89 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FAM25GB3EWG6 89 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ATP6V1G2-DDX39BF2Z307 99 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 F6UZH7 168 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 F8W1H4 67 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 J3QR89 54 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PPYP01298 95 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SLC25A6P12236 298 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 GNG4P50150 75 aa0.47□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RPL37AP61513 92 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms