RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 CRIP2P52943 208 aaPredicted RBP4.29□□□□□ -1.72
CPNE4-214ENST00000617767 SUB1P53999 127 aaKnown RBP eCLIP4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PRR20EP86478 221 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PRR20CP86479 221 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PRR20DP86480 221 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PRR20BP86481 221 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PRR20AP86496 221 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 CCL19Q99731 98 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 ZNF256Q9Y2P7 627 aaPredicted RBP4.29□□□□□ -1.72
CPNE4-214ENST00000617767 AKAP9Q99996 3911 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TRAV41A0A0B4J266 112 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 NPYP01303 97 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 SAA4P35542 130 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TAL2Q16559 108 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 IGFL4Q6B9Z1 124 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 POM121L12Q8N7R1 296 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 WFDC11Q8NEX6 87 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 OR11H6Q8NGC7 330 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TRBV7-3A0A075B6L6 115 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 IGKV1D-37A0A075B6S9 117 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TRAV40A0A0B4J280 105 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV4-61A0A0C4DH41 118 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 G3V318 75 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TIRAPP58753 221 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 UBE2D3P61077 147 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 HERVK_113P61574 105 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 UBE2D2P62837 147 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 LINC00311Q8N616 119 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TRGV9Q99603 122 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 TEX22C9J3V5 150 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 HOXB4P17483 251 aaPredicted RBP4.28□□□□□ -1.72
CPNE4-214ENST00000617767 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 C17orf77Q96MU5 243 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 PAXXQ9BUH6 204 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
CPNE4-214ENST00000617767 AMMECR1Q9Y4X0 333 aaPredicted RBP4.28□□□□□ -1.72
CPNE4-214ENST00000617767 HLA-DRB4P13762 266 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 COX7CP15954 63 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 NXT2Q9NPJ8 142 aaKnown RBP4.27□□□□□ -1.73
CPNE4-214ENST00000617767 HLA-DRB4X5D2U9 266 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 FN1P02751 2386 aaKnown RBP4.27□□□□□ -1.73
CPNE4-214ENST00000617767 IGHV4-30-2A0A087WSY4 118 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 TRBV7-7A0A0K0K1E9 115 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
CPNE4-214ENST00000617767 IGKCP01834 107 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 WI2-2373I1.2A0A1W2PRP0 233 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 C19orf71A6NCJ1 209 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 PGPA6NDG6 321 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 TMEM30BQ3MIR4 351 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 GOLT1AQ6ZVE7 132 aa4.27□□□□□ -1.73
CPNE4-214ENST00000617767 TMEM89A2RUT3 159 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 LY6LH3BQJ8 138 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 HBDP02042 147 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 PRSS1P07477 247 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 IGHV4-38-2P0DP08 117 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 CRYGAP11844 174 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 LMO4P61968 165 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 LY6G5BQ8NDX9 201 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 C9orf85Q96MD7 179 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 IGKV3-7A0A075B6H7 116 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 PEX7O00628 323 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 C8orf31Q8N9H6 132 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 TMEM167BQ9NRX6 74 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 UNC79Q9P2D8 2635 aa4.26□□□□□ -1.73
CPNE4-214ENST00000617767 INS-IGF2F8WCM5 200 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 LGALS9O00182 355 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 SLC25A16P16260 332 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 KRTAP10-9P60411 292 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 TMEM258P61165 79 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 EBI3Q14213 229 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 C6orf226Q5I0X4 101 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 LINC00322Q6ZN03 302 aaPredicted RBP4.25□□□□□ -1.73
CPNE4-214ENST00000617767 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 PIFOQ8TCI5 191 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
CPNE4-214ENST00000617767 SPANXCQ9NY87 97 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 M0R3E3 92 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
CPNE4-214ENST00000617767 ZNF561-AS1K7EIQ3 104 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 ATP6V0E1O15342 81 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 IGKV1-17P01599 117 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 FOXC2Q99958 501 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 C7orf69Q9H7B7 122 aa4.25□□□□□ -1.73
CPNE4-214ENST00000617767 K7EIM0 57 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 AVPP01185 164 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 LINC00482Q8N8I6 264 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 FXYD5Q96DB9 178 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 ODF3BA8MYP8 253 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 H3BMM0 161 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 H7C1H1 209 aa4.24□□□□□ -1.73
CPNE4-214ENST00000617767 I3L2K1 104 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms