RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 HBBP68871 147 aa16.23■□□□□ 0.19
IRF3-227ENST00000600911 BORCS7Q96B45 105 aa16.23■□□□□ 0.19
IRF3-227ENST00000600911 NANOS2P60321 138 aaKnown RBP16.23■□□□□ 0.19
IRF3-227ENST00000600911 ATP5L2Q7Z4Y8 100 aa16.23■□□□□ 0.19
IRF3-227ENST00000600911 FAM74A4Q5TZK3 123 aa16.22■□□□□ 0.19
IRF3-227ENST00000600911 TMEM136Q6ZRR5 245 aa16.22■□□□□ 0.19
IRF3-227ENST00000600911 Q6ZSN1 163 aa16.22■□□□□ 0.19
IRF3-227ENST00000600911 EDA2RQ9HAV5 297 aa16.22■□□□□ 0.19
IRF3-227ENST00000600911 TRGV2A0A075B6R0 118 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 PIK3CD-AS1Q5SR53 167 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 AMN1Q8IY45 258 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 GATD1Q8NB37 220 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 RNF185Q96GF1 192 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 FAM210BQ96KR6 192 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 AP1S3Q96PC3 154 aa16.21■□□□□ 0.19
IRF3-227ENST00000600911 DAD1P61803 113 aa16.2■□□□□ 0.18
IRF3-227ENST00000600911 U3KQK5 164 aa16.2■□□□□ 0.18
IRF3-227ENST00000600911 TRAV4A0A0B4J268 109 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 GAS8-AS1O95177 125 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 HOXA5P20719 270 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 Q6ZTC4 211 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 TMEM191AQ9H0A3 160 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 A8MWV9 139 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 OR4C5Q8NGB2 326 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 C18orf15Q96N68 181 aa16.19■□□□□ 0.18
IRF3-227ENST00000600911 TRGC1P0CF51 173 aa16.18■□□□□ 0.18
IRF3-227ENST00000600911 C11orf45Q8TAV5 145 aa16.18■□□□□ 0.18
IRF3-227ENST00000600911 Q9UF83 564 aa16.18■□□□□ 0.18
IRF3-227ENST00000600911 DNAH7Q8WXX0 4024 aa16.18■□□□□ 0.18
IRF3-227ENST00000600911 MGPP08493 103 aa16.17■□□□□ 0.18
IRF3-227ENST00000600911 RAB4BP61018 213 aa16.17■□□□□ 0.18
IRF3-227ENST00000600911 SLAQ13239 276 aa16.17■□□□□ 0.18
IRF3-227ENST00000600911 NDUFAF3Q9BU61 184 aa16.17■□□□□ 0.18
IRF3-227ENST00000600911 DPH3P1Q9H4G8 78 aa16.17■□□□□ 0.18
IRF3-227ENST00000600911 TRAV26-2A0A0B4J265 109 aa16.16■□□□□ 0.18
IRF3-227ENST00000600911 FHL2Q14192 279 aa16.16■□□□□ 0.18
IRF3-227ENST00000600911 A0A1B0GW15 77 aa16.16■□□□□ 0.18
IRF3-227ENST00000600911 RAB4AP20338 218 aa16.16■□□□□ 0.18
IRF3-227ENST00000600911 FAM104BQ5XKR9 115 aa16.16■□□□□ 0.18
IRF3-227ENST00000600911 TGP01266 2768 aa16.15■□□□□ 0.18
IRF3-227ENST00000600911 SMKR1H3BMG3 65 aa16.15■□□□□ 0.18
IRF3-227ENST00000600911 RASL11AQ6T310 242 aa16.15■□□□□ 0.18
IRF3-227ENST00000600911 P0DMU3 169 aa16.14■□□□□ 0.17
IRF3-227ENST00000600911 FAM231AP0DMU4 169 aa16.14■□□□□ 0.17
IRF3-227ENST00000600911 FAM231CP0DMU5 169 aa16.14■□□□□ 0.17
IRF3-227ENST00000600911 GATA1P15976 413 aaPredicted RBP16.14■□□□□ 0.17
IRF3-227ENST00000600911 MRPL51Q4U2R6 128 aaKnown RBP16.14■□□□□ 0.17
IRF3-227ENST00000600911 HTN3P15516 51 aa16.13■□□□□ 0.17
IRF3-227ENST00000600911 KIAA1644Q3SXP7 199 aa16.13■□□□□ 0.17
IRF3-227ENST00000600911 SUMO4Q6EEV6 95 aa16.13■□□□□ 0.17
IRF3-227ENST00000600911 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.13■□□□□ 0.17
IRF3-227ENST00000600911 TEX48A0A1B0GUV7 120 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 NCR2O95944 276 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 ZNF56Q15929 161 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 GNB1LQ9BYB4 327 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 SMIM17P0DL12 118 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 RAB5AP20339 215 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 ZFP2Q6ZN57 461 aa16.12■□□□□ 0.17
IRF3-227ENST00000600911 ATP5G1P05496 136 aa16.11■□□□□ 0.17
IRF3-227ENST00000600911 MRPL18Q9H0U6 180 aaKnown RBP16.11■□□□□ 0.17
IRF3-227ENST00000600911 CSMD3Q7Z407 3707 aa16.11■□□□□ 0.17
IRF3-227ENST00000600911 F5H697 171 aa16.1■□□□□ 0.17
IRF3-227ENST00000600911 S100A8P05109 93 aa16.1■□□□□ 0.17
IRF3-227ENST00000600911 RPS10P46783 165 aaKnown RBP16.1■□□□□ 0.17
IRF3-227ENST00000600911 SMIM15Q7Z3B0 74 aa16.1■□□□□ 0.17
IRF3-227ENST00000600911 DYNC2H1Q8NCM8 4307 aaKnown RBP16.1■□□□□ 0.17
IRF3-227ENST00000600911 LOC100131303A0A0U1RQF7 123 aa16.09■□□□□ 0.17
IRF3-227ENST00000600911 FABP9Q0Z7S8 132 aa16.09■□□□□ 0.17
IRF3-227ENST00000600911 SLC25A29Q8N8R3 303 aa16.09■□□□□ 0.17
IRF3-227ENST00000600911 TRGV4A0A0C4DH28 118 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 F5H768 121 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 RHODO00212 210 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 HLA-DQA1P01909 254 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 RPL39LQ96EH5 51 aaKnown RBP16.08■□□□□ 0.17
IRF3-227ENST00000600911 TRAPPC1Q9Y5R8 145 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 STARD9Q9P2P6 4700 aa16.08■□□□□ 0.17
IRF3-227ENST00000600911 M0QY20 66 aa16.08■□□□□ 0.16
IRF3-227ENST00000600911 PHOX2AO14813 284 aa16.08■□□□□ 0.16
IRF3-227ENST00000600911 FRZBQ92765 325 aa16.08■□□□□ 0.16
IRF3-227ENST00000600911 D6R8Y8 96 aa16.07■□□□□ 0.16
IRF3-227ENST00000600911 APCSP02743 223 aa16.07■□□□□ 0.16
IRF3-227ENST00000600911 VSIG2Q96IQ7 327 aa16.07■□□□□ 0.16
IRF3-227ENST00000600911 A0A0J9YY99 117 aa16.06■□□□□ 0.16
IRF3-227ENST00000600911 TRGC2P03986 189 aa16.06■□□□□ 0.16
IRF3-227ENST00000600911 CRYBA4P53673 196 aa16.05■□□□□ 0.16
IRF3-227ENST00000600911 DEFB131BA0A096LNP1 70 aa16.05■□□□□ 0.16
IRF3-227ENST00000600911 COX19Q49B96 90 aa16.05■□□□□ 0.16
IRF3-227ENST00000600911 NRACQ8N912 160 aa16.05■□□□□ 0.16
IRF3-227ENST00000600911 HHLA3Q9XRX5 114 aa16.05■□□□□ 0.16
IRF3-227ENST00000600911 TRAV26-1A0A087WT03 109 aa16.04■□□□□ 0.16
IRF3-227ENST00000600911 K7EQD1 137 aa16.04■□□□□ 0.16
IRF3-227ENST00000600911 MT-ND6P03923 174 aa16.04■□□□□ 0.16
IRF3-227ENST00000600911 NPYP01303 97 aa16.03■□□□□ 0.16
IRF3-227ENST00000600911 NEXN-AS1Q8NBZ9 246 aa16.03■□□□□ 0.16
IRF3-227ENST00000600911 PRO0255Q9UI72 69 aa16.02■□□□□ 0.16
IRF3-227ENST00000600911 PLECQ15149 4684 aaKnown RBP16.01■□□□□ 0.15
IRF3-227ENST00000600911 TRBV6-4A0A1B0GX49 114 aa16.01■□□□□ 0.15
IRF3-227ENST00000600911 CIDEAO60543 219 aa16.01■□□□□ 0.15
IRF3-227ENST00000600911 CKS2P33552 79 aa16.01■□□□□ 0.15
IRF3-227ENST00000600911 PHLDA1Q8WV24 401 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms