RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 TWIST1Q15672 202 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 FAM210BQ96KR6 192 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 AP1S3Q96PC3 154 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
RPRD1A-208ENST00000589050 MUC4Q99102 2169 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 A0A0J9YY99 117 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 RHODO00212 210 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 CRYGDP07320 174 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 TRGC1P0CF51 173 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 SMIM17P0DL12 118 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 SLAQ13239 276 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 C14orf178Q8N769 122 aaPredicted RBP10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 CLRN3Q8NCR9 226 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
RPRD1A-208ENST00000589050 PAX4O43316 350 aa10.84□□□□□ -0.67
RPRD1A-208ENST00000589050 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
RPRD1A-208ENST00000589050 CRYBA4P53673 196 aa10.84□□□□□ -0.67
RPRD1A-208ENST00000589050 SVBPQ8N300 66 aa10.84□□□□□ -0.67
RPRD1A-208ENST00000589050 CTDSP1Q9GZU7 261 aa10.84□□□□□ -0.67
RPRD1A-208ENST00000589050 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
RPRD1A-208ENST00000589050 RIGQ13278 110 aa10.83□□□□□ -0.68
RPRD1A-208ENST00000589050 RHEBQ15382 184 aa10.83□□□□□ -0.68
RPRD1A-208ENST00000589050 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
RPRD1A-208ENST00000589050 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
RPRD1A-208ENST00000589050 SNAPINO95295 136 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 EVI2AP22794 236 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 FAM3BP58499 235 aaPredicted RBP10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 ZNF56Q15929 161 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 Q6ZSN1 163 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
RPRD1A-208ENST00000589050 H3BNG1 76 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 NUDT3O95989 172 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 MGPP08493 103 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 TCTAP57738 103 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 DPH3P1Q9H4G8 78 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 APLNQ9ULZ1 77 aa10.81□□□□□ -0.68
RPRD1A-208ENST00000589050 A0A087WWC5 75 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 F5H697 171 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 RAB4BP61018 213 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 RHOHQ15669 191 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 MRPL54Q6P161 138 aaKnown RBP10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 IMMP2LQ96T52 175 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
RPRD1A-208ENST00000589050 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 K7EQD1 137 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 GYPEP15421 78 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 LINC00315P59091 139 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 KCNIP4Q6PIL6 250 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 ICOSQ9Y6W8 199 aa10.79□□□□□ -0.68
RPRD1A-208ENST00000589050 CSMD3Q7Z407 3707 aa10.78□□□□□ -0.68
RPRD1A-208ENST00000589050 A0A1B0GW15 77 aa10.78□□□□□ -0.68
RPRD1A-208ENST00000589050 STARD9Q9P2P6 4700 aa10.78□□□□□ -0.68
RPRD1A-208ENST00000589050 S100PP25815 95 aa10.77□□□□□ -0.69
RPRD1A-208ENST00000589050 CAMPP49913 170 aa10.77□□□□□ -0.69
RPRD1A-208ENST00000589050 HBBP68871 147 aa10.77□□□□□ -0.69
RPRD1A-208ENST00000589050 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
RPRD1A-208ENST00000589050 A0A096LPF7 62 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 A0A1B0GXF2 115 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 S100A8P05109 93 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 P0DMU3 169 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 BTF3L4Q96K17 158 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
RPRD1A-208ENST00000589050 DYNC2H1Q8NCM8 4307 aaKnown RBP10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 SRIP30626 198 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 GAGE1Q13065 139 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 GAGE4Q13068 117 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 GAGE5Q13069 117 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 ATRAIDQ6UW56 229 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 Q9UF83 564 aa10.75□□□□□ -0.69
RPRD1A-208ENST00000589050 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
RPRD1A-208ENST00000589050 H7C1H1 209 aa10.74□□□□□ -0.69
RPRD1A-208ENST00000589050 AMN1Q8IY45 258 aa10.74□□□□□ -0.69
RPRD1A-208ENST00000589050 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
RPRD1A-208ENST00000589050 TRAV9-1A0A075B6T8 112 aa10.73□□□□□ -0.69
RPRD1A-208ENST00000589050 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
RPRD1A-208ENST00000589050 M0QY20 66 aa10.73□□□□□ -0.69
RPRD1A-208ENST00000589050 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
RPRD1A-208ENST00000589050 RAB4AP20338 218 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 FAM104BQ5XKR9 115 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 GATD1Q8NB37 220 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms