RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 UBE2E1P51965 193 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 DSCR9P59020 149 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 ZNF491Q8N8L2 437 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 KLHL30-AS1Q8NEE0 82 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 KLF14Q8TD94 323 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-203ENST00000585448 RNASE6Q93091 150 aaKnown RBP4.5□□□□□ -1.69
SMAD4-203ENST00000585448 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 SMIM2Q9BVW6 85 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 HES7Q9BYE0 225 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 MYOFQ9NZM1 2061 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV3OR16-10A0A075B7F0 116 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV1OR21-1A0A087WYE8 117 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 IGKV3D-11A0A0A0MRZ8 115 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 I3L3M4 83 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 CCL21O00585 134 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 COX7A2LO14548 114 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 NDUFS5O43920 106 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 EFNA2O43921 213 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 VPREB1P12018 145 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
SMAD4-203ENST00000585448 IMMP1LQ96LU5 166 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 AMELXQ99217 191 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 TM2D3Q9BRN9 247 aa4.49□□□□□ -1.69
SMAD4-203ENST00000585448 TNRC6BQ9UPQ9 1833 aaKnown RBP4.49□□□□□ -1.69
SMAD4-203ENST00000585448 IGKV1D-37A0A075B6S9 117 aa4.48□□□□□ -1.69
SMAD4-203ENST00000585448 IGF1P05019 195 aa4.48□□□□□ -1.69
SMAD4-203ENST00000585448 BAALC-AS2P0C853 105 aa4.48□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV4-30-4P0DP06 118 aa4.48□□□□□ -1.69
SMAD4-203ENST00000585448 DAD1P61803 113 aa4.48□□□□□ -1.69
SMAD4-203ENST00000585448 HEATR1Q9H583 2144 aaKnown RBP4.48□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV4-4A0A075B6R2 117 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 IGKV3D-7A0A0C4DH55 119 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 A0A0J9YXY3 114 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 TRBV27A0A0K0K1C4 114 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 H3BTX0 84 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 M0R381 172 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV4-34P06331 123 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 PLA2G2AP14555 144 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 PDE6HQ13956 83 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 C2orf66Q6UXQ4 117 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 LY6G5BQ8NDX9 201 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
SMAD4-203ENST00000585448 MUC22E2RYF6 1773 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-203ENST00000585448 IGLV4-69A0A075B6H9 119 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 IGHV1OR15-9A0A0B4J2B8 117 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 IGIPA6NJ69 53 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 ZNF80P51504 273 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-203ENST00000585448 RPS21P63220 83 aaKnown RBP4.46□□□□□ -1.7
SMAD4-203ENST00000585448 SS18Q15532 418 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 TMEM30BQ3MIR4 351 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 PVRIGQ6DKI7 326 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 C14orf178Q8N769 122 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-203ENST00000585448 DYNLRB2Q8TF09 96 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 TIMM17AQ99595 171 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 DEFB127Q9H1M4 99 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 NDUFA4L2Q9NRX3 87 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 LRRK1Q38SD2 2015 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 CEP192Q8TEP8 1941 aa4.46□□□□□ -1.7
SMAD4-203ENST00000585448 EML6Q6ZMW3 1958 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 APOC4P55056 127 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 BLCAPP62952 87 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 FKBP1BP68106 108 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 MIAQ16674 131 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 ESRGQ1W209 222 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 RUSC1-AS1Q66K80 236 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 C18orf65Q6ZTR6 163 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 UBE2E2Q96LR5 201 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 DYSFO75923 2080 aa4.45□□□□□ -1.7
SMAD4-203ENST00000585448 A0A1B0GUV1 79 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 F8WEM9 126 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 ERC2-IT1O76042 136 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 CIRBPQ14011 172 aaKnown RBP4.44□□□□□ -1.7
SMAD4-203ENST00000585448 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 VMO1Q7Z5L0 202 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 WDR86Q86TI4 376 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 C17orf82Q86X59 251 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-203ENST00000585448 Q8N2B8 174 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 TET1Q8NFU7 2136 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 OBSCN-AS1Q96MR7 158 aa4.44□□□□□ -1.7
SMAD4-203ENST00000585448 A0A087WVE0 104 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 M0R1W7 72 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 NTN3O00634 580 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-203ENST00000585448 SOCS3O14543 225 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 UBE2L6O14933 153 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 IGHV1-69P01742 117 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 CD59P13987 128 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 UBE2BP63146 152 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 Q1T7F1 81 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 C11orf68Q9H3H3 251 aaKnown RBP4.43□□□□□ -1.7
SMAD4-203ENST00000585448 CTSZQ9UBR2 303 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 MYO7BQ6PIF6 2116 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms