RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 SULT1A1P50225 295 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 RAB5CP51148 216 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 GAGE6Q13070 117 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 LYRM2Q9NU23 88 aaPredicted RBP10.01□□□□□ -0.81
CLK3-217ENST00000566126 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
CLK3-217ENST00000566126 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
CLK3-217ENST00000566126 P01737 135 aa10□□□□□ -0.81
CLK3-217ENST00000566126 ARL6IP6Q8N6S5 226 aa10□□□□□ -0.81
CLK3-217ENST00000566126 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
CLK3-217ENST00000566126 IL36BQ9NZH7 164 aa10□□□□□ -0.81
CLK3-217ENST00000566126 GZMBP10144 247 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 TOMM5Q8N4H5 51 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 THAP6Q8TBB0 222 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 LINC00474Q9P2X8 69 aa9.99□□□□□ -0.81
CLK3-217ENST00000566126 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
CLK3-217ENST00000566126 KRTAP9-7A8MTY7 169 aa9.98□□□□□ -0.81
CLK3-217ENST00000566126 TMEM252Q8N6L7 170 aa9.98□□□□□ -0.81
CLK3-217ENST00000566126 C20orf203Q8NBC4 194 aa9.98□□□□□ -0.81
CLK3-217ENST00000566126 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
CLK3-217ENST00000566126 H3BVH4 76 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 HBG1P69891 147 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 HBG2P69892 147 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 ATP6V1FQ16864 119 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 MITD1Q8WV92 249 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 MBD2Q9UBB5 411 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
CLK3-217ENST00000566126 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLK3-217ENST00000566126 AP3S2P59780 193 aa9.96□□□□□ -0.82
CLK3-217ENST00000566126 SMUG1Q53HV7 270 aa9.96□□□□□ -0.82
CLK3-217ENST00000566126 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
CLK3-217ENST00000566126 STX12Q86Y82 276 aa9.95□□□□□ -0.82
CLK3-217ENST00000566126 FER1L6-AS1Q8NA97 138 aa9.95□□□□□ -0.82
CLK3-217ENST00000566126 OR11H4Q8NGC9 324 aa9.95□□□□□ -0.82
CLK3-217ENST00000566126 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
CLK3-217ENST00000566126 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
CLK3-217ENST00000566126 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
CLK3-217ENST00000566126 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
CLK3-217ENST00000566126 CFAP161Q6P656 301 aa9.94□□□□□ -0.82
CLK3-217ENST00000566126 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
CLK3-217ENST00000566126 PSG8Q9UQ74 426 aa9.94□□□□□ -0.82
CLK3-217ENST00000566126 MT-ND6P03923 174 aa9.93□□□□□ -0.82
CLK3-217ENST00000566126 ARMS2P0C7Q2 107 aa9.93□□□□□ -0.82
CLK3-217ENST00000566126 SPCS2Q15005 226 aa9.93□□□□□ -0.82
CLK3-217ENST00000566126 ZFP69Q49AA0 526 aa9.93□□□□□ -0.82
CLK3-217ENST00000566126 PRR27Q6MZM9 219 aa9.93□□□□□ -0.82
CLK3-217ENST00000566126 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
CLK3-217ENST00000566126 H0Y9J4 135 aa9.92□□□□□ -0.82
CLK3-217ENST00000566126 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 GVQW2A0A096LPI5 108 aaPredicted RBP9.91□□□□□ -0.82
CLK3-217ENST00000566126 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 M0R381 172 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
CLK3-217ENST00000566126 TMEM97Q5BJF2 176 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 DERL1Q9BUN8 251 aa9.91□□□□□ -0.82
CLK3-217ENST00000566126 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 SERTM2A0A1B0GWG4 89 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 NDUFB6O95139 128 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 TSPAN13O95857 204 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 TCRAP04437 139 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 PVALBP20472 110 aaPredicted RBP9.9□□□□□ -0.82
CLK3-217ENST00000566126 IQCJQ1A5X6 159 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 PRNTQ86SH4 94 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 DEDD2Q8WXF8 326 aa9.9□□□□□ -0.82
CLK3-217ENST00000566126 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 B4DEV8 164 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 IGLV7-43P04211 117 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 TAS2R45P59539 299 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 RAB4BP61018 213 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 RAB2AP61019 212 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
CLK3-217ENST00000566126 NHLH2Q02577 135 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
CLK3-217ENST00000566126 WDR61Q9GZS3 305 aaKnown RBP9.89□□□□□ -0.83
CLK3-217ENST00000566126 KCNIP2Q9NS61 270 aa9.89□□□□□ -0.83
CLK3-217ENST00000566126 GRIFINA4D1Z8 144 aa9.88□□□□□ -0.83
CLK3-217ENST00000566126 OR5C1Q8NGR4 320 aa9.88□□□□□ -0.83
CLK3-217ENST00000566126 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
CLK3-217ENST00000566126 A0A1B0GUV1 79 aa9.87□□□□□ -0.83
CLK3-217ENST00000566126 FAM25EA8MYX2 175 aa9.87□□□□□ -0.83
CLK3-217ENST00000566126 UBE2D1P51668 147 aa9.87□□□□□ -0.83
CLK3-217ENST00000566126 PYDC2Q56P42 97 aa9.87□□□□□ -0.83
CLK3-217ENST00000566126 PKIGQ9Y2B9 76 aa9.87□□□□□ -0.83
CLK3-217ENST00000566126 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 KRBOX1C9JBD0 128 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 ATP6V1G2O95670 118 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
CLK3-217ENST00000566126 AMTP48728 403 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 ZNF56Q15929 161 aa9.86□□□□□ -0.83
CLK3-217ENST00000566126 MRPS26Q9BYN8 205 aaKnown RBP9.86□□□□□ -0.83
CLK3-217ENST00000566126 RAB32Q13637 225 aa9.85□□□□□ -0.83
CLK3-217ENST00000566126 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
CLK3-217ENST00000566126 ZFP82Q8N141 532 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms