RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 CCDC140Q96MF4 163 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 CSMD1Q96PZ7 3565 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 TRAV8-4A0A0B4J246 113 aa10.58□□□□□ -0.72
RABGGTA-220ENST00000560998 ATP5J2P56134 94 aa10.58□□□□□ -0.72
RABGGTA-220ENST00000560998 RASL10AQ92737 203 aa10.58□□□□□ -0.72
RABGGTA-220ENST00000560998 DOPEY1Q5JWR5 2465 aa10.58□□□□□ -0.72
RABGGTA-220ENST00000560998 C9JAW5 83 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 IGHV4-30-2A0A087WSY4 118 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
RABGGTA-220ENST00000560998 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 CLPSL1A2RUU4 121 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 CRLF1O75462 422 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 ATXN8Q156A1 80 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 Q8N1Y9 231 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 FLNCQ14315 2725 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 TRAV41A0A0B4J266 112 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 A0A0B4J2C4 111 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 M0R381 172 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 BUB3O43684 328 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 IGHV4-38-2P0DP08 117 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 SPANXN1Q5VSR9 72 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
RABGGTA-220ENST00000560998 BRI3O95415 125 aa10.55□□□□□ -0.72
RABGGTA-220ENST00000560998 PPP1R17O96001 155 aa10.55□□□□□ -0.72
RABGGTA-220ENST00000560998 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
RABGGTA-220ENST00000560998 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
RABGGTA-220ENST00000560998 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 HIF1ANQ9NWT6 349 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 MSMBP08118 114 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 YAE1D1Q9NRH1 226 aa10.54□□□□□ -0.72
RABGGTA-220ENST00000560998 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 ANXA2RQ3ZCQ2 193 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 LINC00527Q9UJ94 153 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 ACACBO00763 2458 aa10.53□□□□□ -0.72
RABGGTA-220ENST00000560998 TRBV10-2A0A0K0K1G8 114 aa10.52□□□□□ -0.72
RABGGTA-220ENST00000560998 H3BMM0 161 aa10.52□□□□□ -0.72
RABGGTA-220ENST00000560998 LINC01620Q4KN68 170 aa10.52□□□□□ -0.72
RABGGTA-220ENST00000560998 UBE2WQ96B02 151 aa10.52□□□□□ -0.72
RABGGTA-220ENST00000560998 KLK15Q9H2R5 256 aa10.52□□□□□ -0.72
RABGGTA-220ENST00000560998 SVEP1Q4LDE5 3571 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 IGHV3-66A0A0C4DH42 116 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 A6NDX4 124 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 TGFAP01135 160 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 KLHL30-AS1Q8NEE0 82 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 METTL26Q96S19 204 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 VPREB3Q9UKI3 123 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 U3KQE9 123 aa10.52□□□□□ -0.73
RABGGTA-220ENST00000560998 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
RABGGTA-220ENST00000560998 LGALS9O00182 355 aa10.51□□□□□ -0.73
RABGGTA-220ENST00000560998 IGF1P05019 195 aa10.51□□□□□ -0.73
RABGGTA-220ENST00000560998 LY6EQ16553 131 aa10.51□□□□□ -0.73
RABGGTA-220ENST00000560998 TMEM263Q8WUH6 116 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-220ENST00000560998 TRBV7-7A0A0K0K1E9 115 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 H3BUX3 64 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 TMEM141Q96I45 108 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 DPH3P1Q9H4G8 78 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 SPG11Q96JI7 2443 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 PRAC2D3DTV9 90 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 CRYGDP07320 174 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 PMVKQ15126 192 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 Q6ZQT7 251 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 Q6ZS46 218 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
RABGGTA-220ENST00000560998 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 B4DSR2 109 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 H3BT86 120 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 IGHG2P01859 326 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 DSCR9P59020 149 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 NRGNQ92686 78 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 VPS13CQ709C8 3753 aa10.49□□□□□ -0.73
RABGGTA-220ENST00000560998 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms